RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Aebp2Q9Z248 504 aaKnown RBP17.24■□□□□ 0.35
Rnf40-202ENSMUST00000205694 Arhgap35Q91YM2 1499 aa17.24■□□□□ 0.35
Rnf40-202ENSMUST00000205694 Ncoa2Q61026 1462 aa17.24■□□□□ 0.35
Rnf40-202ENSMUST00000205694 Fgd6Q69ZL1 1399 aa17.22■□□□□ 0.35
Rnf40-202ENSMUST00000205694 Zfp777B9EKF4 885 aa17.22■□□□□ 0.35
Rnf40-202ENSMUST00000205694 Mroh2bQ7M6Y6 1581 aa17.21■□□□□ 0.35
Rnf40-202ENSMUST00000205694 Ythdc1E9Q5K9 736 aaKnown RBP17.21■□□□□ 0.35
Rnf40-202ENSMUST00000205694 Jph4Q80WT0 628 aa17.21■□□□□ 0.35
Rnf40-202ENSMUST00000205694 Znf326O88291 580 aa17.2■□□□□ 0.34
Rnf40-202ENSMUST00000205694 Chmp4bQ9D8B3 224 aaKnown RBP17.2■□□□□ 0.34
Rnf40-202ENSMUST00000205694 Lmod3E9QA62 571 aa17.19■□□□□ 0.34
Rnf40-202ENSMUST00000205694 Neurod2Q62414 383 aa17.18■□□□□ 0.34
Rnf40-202ENSMUST00000205694 Apbb1Q9QXJ1 710 aa17.18■□□□□ 0.34
Rnf40-202ENSMUST00000205694 Iqcf3Q9D498 203 aa17.17■□□□□ 0.34
Rnf40-202ENSMUST00000205694 Htatsf1Q8BGC0 757 aa17.16■□□□□ 0.34
Rnf40-202ENSMUST00000205694 TnnQ80Z71 1560 aa17.16■□□□□ 0.34
Rnf40-202ENSMUST00000205694 PtprkP35822 1457 aa17.15■□□□□ 0.34
Rnf40-202ENSMUST00000205694 Lemd3Q9WU40 921 aa17.15■□□□□ 0.34
Rnf40-202ENSMUST00000205694 SynmQ70IV5 1561 aa17.14■□□□□ 0.34
Rnf40-202ENSMUST00000205694 Stk24Q99KH8 431 aa17.14■□□□□ 0.33
Rnf40-202ENSMUST00000205694 NudcO35685 332 aaKnown RBP17.14■□□□□ 0.33
Rnf40-202ENSMUST00000205694 Stag3O70576 1240 aa17.14■□□□□ 0.33
Rnf40-202ENSMUST00000205694 PtmaP26350 111 aa17.14■□□□□ 0.33
Rnf40-202ENSMUST00000205694 Arid4bA2CG63 1314 aaKnown RBP17.14■□□□□ 0.33
Rnf40-202ENSMUST00000205694 Gm7298A0A0N4SVU1 1476 aa17.14■□□□□ 0.33
Rnf40-202ENSMUST00000205694 Ppm1gQ61074 542 aa17.12■□□□□ 0.33
Rnf40-202ENSMUST00000205694 Gm6268A2A3U9 297 aa17.11■□□□□ 0.33
Rnf40-202ENSMUST00000205694 Plcb2A3KGF7 1181 aa17.11■□□□□ 0.33
Rnf40-202ENSMUST00000205694 AqrQ8CFQ3 1481 aaKnown RBP17.11■□□□□ 0.33
Rnf40-202ENSMUST00000205694 EprsQ8CGC7 1512 aaKnown RBP17.11■□□□□ 0.33
Rnf40-202ENSMUST00000205694 Cux1P53564 1515 aa17.09■□□□□ 0.33
Rnf40-202ENSMUST00000205694 Map7O88735 730 aa17.09■□□□□ 0.33
Rnf40-202ENSMUST00000205694 TchhA0A0B4J1F9 1599 aa17.09■□□□□ 0.33
Rnf40-202ENSMUST00000205694 NgefQ8CHT1 710 aa17.09■□□□□ 0.33
Rnf40-202ENSMUST00000205694 CadpsQ80TJ1 1355 aa17.08■□□□□ 0.33
Rnf40-202ENSMUST00000205694 Ccnb3Q810T2 1396 aa17.08■□□□□ 0.32
Rnf40-202ENSMUST00000205694 Plekhh2Q8C115 1491 aa17.07■□□□□ 0.32
Rnf40-202ENSMUST00000205694 Grin2aP35436 1464 aa17.06■□□□□ 0.32
Rnf40-202ENSMUST00000205694 Kif21aQ9QXL2 1672 aa17.04■□□□□ 0.32
Rnf40-202ENSMUST00000205694 MyclP10166 368 aa17.04■□□□□ 0.32
Rnf40-202ENSMUST00000205694 Rtn4Q99P72 1162 aaKnown RBP17.03■□□□□ 0.32
Rnf40-202ENSMUST00000205694 1700019A02RikA0A087WPV9 146 aa17.03■□□□□ 0.32
Rnf40-202ENSMUST00000205694 Gm14025A2AP89 1413 aa17.03■□□□□ 0.32
Rnf40-202ENSMUST00000205694 PnnO35691 725 aaKnown RBP17.02■□□□□ 0.32
Rnf40-202ENSMUST00000205694 Fam71e1A1L3C1 212 aa17.02■□□□□ 0.32
Rnf40-202ENSMUST00000205694 Pes1Q9EQ61 584 aaKnown RBP17.02■□□□□ 0.32
Rnf40-202ENSMUST00000205694 Ccdc27Q3V036 639 aa17■□□□□ 0.31
Rnf40-202ENSMUST00000205694 Cabp1Q9JLK7 227 aa17■□□□□ 0.31
Rnf40-202ENSMUST00000205694 1700123L14RikQ3V2K7 440 aa16.99■□□□□ 0.31
Rnf40-202ENSMUST00000205694 Map4P27546 1125 aaKnown RBP16.99■□□□□ 0.31
Rnf40-202ENSMUST00000205694 Mbd3Q9Z2D8 285 aaKnown RBP16.99■□□□□ 0.31
Rnf40-202ENSMUST00000205694 Cnga1P29974 684 aa16.98■□□□□ 0.31
Rnf40-202ENSMUST00000205694 Arhgap31A6X8Z5 1425 aa16.98■□□□□ 0.31
Rnf40-202ENSMUST00000205694 Hspa5P20029 655 aaKnown RBP16.98■□□□□ 0.31
Rnf40-202ENSMUST00000205694 Ccdc141E9Q8Q6 1531 aa16.98■□□□□ 0.31
Rnf40-202ENSMUST00000205694 Dbr1Q923B1 550 aa16.98■□□□□ 0.31
Rnf40-202ENSMUST00000205694 Hsp90b1P08113 802 aaKnown RBP16.97■□□□□ 0.31
Rnf40-202ENSMUST00000205694 Casc1Q6TDU8 730 aa16.97■□□□□ 0.31
Rnf40-202ENSMUST00000205694 Rwdd1Q9CQK7 243 aa16.96■□□□□ 0.31
Rnf40-202ENSMUST00000205694 KnstrnQ9D9Z1 312 aaKnown RBP16.96■□□□□ 0.31
Rnf40-202ENSMUST00000205694 UacaQ8CGB3 1411 aa16.96■□□□□ 0.31
Rnf40-202ENSMUST00000205694 Sart1Q9Z315 806 aaKnown RBP16.95■□□□□ 0.3
Rnf40-202ENSMUST00000205694 Wwc2Q6NXJ0 1187 aa16.95■□□□□ 0.3
Rnf40-202ENSMUST00000205694 Armcx1Q9CX83 456 aa16.95■□□□□ 0.3
Rnf40-202ENSMUST00000205694 Pkd2O35245 966 aa16.94■□□□□ 0.3
Rnf40-202ENSMUST00000205694 Rsph4aQ8BYM7 716 aa16.94■□□□□ 0.3
Rnf40-202ENSMUST00000205694 HnrnpuQ8VEK3 800 aaKnown RBP16.93■□□□□ 0.3
Rnf40-202ENSMUST00000205694 Fhad1A6PWD2 1420 aa16.92■□□□□ 0.3
Rnf40-202ENSMUST00000205694 B4galnt3Q6L8S8 986 aa16.91■□□□□ 0.3
Rnf40-202ENSMUST00000205694 MccE9PWI3 1003 aa16.9■□□□□ 0.3
Rnf40-202ENSMUST00000205694 Rundc1Q0VDN7 615 aa16.9■□□□□ 0.3
Rnf40-202ENSMUST00000205694 Gtf2e1Q9D0D5 440 aa16.89■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Arhgef5E9Q7D5 1581 aa16.89■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Neo1P97798 1493 aa16.88■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Rtf1A2AQ19 715 aaKnown RBP16.88■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Naip1Q9QWK5 1403 aa16.88■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Arap1Q4LDD4 1452 aa16.88■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Nup155Q99P88 1391 aaKnown RBP16.87■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Eif4g2Q62448 906 aaKnown RBP16.87■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Disp1Q3TDN0 1521 aa16.87■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Clstn1Q9EPL2 979 aa16.86■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Tdrd9Q14BI7 1383 aa16.85■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Kif3bQ61771 747 aa16.85■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Speer4f1Q9D5Q6 258 aa16.85■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Ifit1bl1D3Z6F0 470 aa16.84■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Sh3bp5Q9Z131 463 aa16.84■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Sart3Q9JLI8 962 aaKnown RBP16.84■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Tmf1B9EKI3 1091 aa16.84■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Adam1bQ8R534 806 aa16.84■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Tcerg1Q8CGF7 1100 aaKnown RBP16.83■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Chmp5Q9D7S9 219 aa16.83■□□□□ 0.29
Rnf40-202ENSMUST00000205694 Samd9lQ69Z37 1561 aa16.83■□□□□ 0.28
Rnf40-202ENSMUST00000205694 Arhgap5P97393 1501 aa16.83■□□□□ 0.28
Rnf40-202ENSMUST00000205694 Igf1rQ60751 1373 aa16.83■□□□□ 0.28
Rnf40-202ENSMUST00000205694 Zscan21Q07231 555 aa16.82■□□□□ 0.28
Rnf40-202ENSMUST00000205694 Mphosph9A6H5Y1 991 aa16.82■□□□□ 0.28
Rnf40-202ENSMUST00000205694 Trak1Q6PD31 939 aa16.82■□□□□ 0.28
Rnf40-202ENSMUST00000205694 Pde3bQ61409 1100 aa16.82■□□□□ 0.28
Rnf40-202ENSMUST00000205694 Fam163aQ8CAA5 168 aa16.82■□□□□ 0.28
Rnf40-202ENSMUST00000205694 Unc13aQ4KUS2 1712 aa16.81■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms