RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Rhox8Q6VSS7 320 aa23.54■■□□□ 1.36
Rnf40-202ENSMUST00000205694 NischQ80TM9 1593 aa22.66■■□□□ 1.22
Rnf40-202ENSMUST00000205694 Abcc9P70170 1546 aa21.52■■□□□ 1.04
Rnf40-202ENSMUST00000205694 Rpgrip1Q9EPQ2 1331 aa21.36■■□□□ 1.01
Rnf40-202ENSMUST00000205694 Gm35339A0A140LHH9 1649 aa21.33■■□□□ 1.01
Rnf40-202ENSMUST00000205694 Abcc8B2RUS7 1588 aa21.2■□□□□ 0.99
Rnf40-202ENSMUST00000205694 Ehmt2Q9Z148 1263 aaKnown RBP20.92■□□□□ 0.94
Rnf40-202ENSMUST00000205694 Esf1Q3V1V3 845 aaKnown RBP20.77■□□□□ 0.91
Rnf40-202ENSMUST00000205694 Ccdc136Q3TVA9 1136 aa20.76■□□□□ 0.91
Rnf40-202ENSMUST00000205694 Cngb1E1AZ71 1325 aa20.69■□□□□ 0.9
Rnf40-202ENSMUST00000205694 Las1lA2BE28 776 aaKnown RBP20.59■□□□□ 0.89
Rnf40-202ENSMUST00000205694 Wdr66E9Q743 1299 aa20.54■□□□□ 0.88
Rnf40-202ENSMUST00000205694 Ube2uB1AUC4 352 aa20.51■□□□□ 0.87
Rnf40-202ENSMUST00000205694 Trim41Q5NCC3 630 aa20.43■□□□□ 0.86
Rnf40-202ENSMUST00000205694 Zeb1Q64318 1117 aa20.43■□□□□ 0.86
Rnf40-202ENSMUST00000205694 Gab3Q8BSM5 595 aa20.4■□□□□ 0.86
Rnf40-202ENSMUST00000205694 Npm2Q80W85 207 aa20.33■□□□□ 0.85
Rnf40-202ENSMUST00000205694 Pelp1Q9DBD5 1123 aaKnown RBP20.27■□□□□ 0.83
Rnf40-202ENSMUST00000205694 Zcchc6Q5BLK4 1491 aaKnown RBP20.18■□□□□ 0.82
Rnf40-202ENSMUST00000205694 Myt1lP97500 1187 aa20.13■□□□□ 0.81
Rnf40-202ENSMUST00000205694 NacadQ5SWP3 1504 aa20.03■□□□□ 0.8
Rnf40-202ENSMUST00000205694 Rtl1Q7M732 1744 aa20.03■□□□□ 0.8
Rnf40-202ENSMUST00000205694 Rb1cc1Q9ESK9 1588 aa19.89■□□□□ 0.77
Rnf40-202ENSMUST00000205694 Ccdc180J3QNE4 1664 aa19.76■□□□□ 0.75
Rnf40-202ENSMUST00000205694 NefmP08553 848 aa19.73■□□□□ 0.75
Rnf40-202ENSMUST00000205694 Kdm5dQ62240 1548 aa19.7■□□□□ 0.74
Rnf40-202ENSMUST00000205694 Dcaf1Q80TR8 1506 aa19.69■□□□□ 0.74
Rnf40-202ENSMUST00000205694 UbtfP25976 765 aaKnown RBP19.67■□□□□ 0.74
Rnf40-202ENSMUST00000205694 Acin1Q9JIX8 1338 aaKnown RBP19.63■□□□□ 0.73
Rnf40-202ENSMUST00000205694 Stra8P70278 393 aa19.61■□□□□ 0.73
Rnf40-202ENSMUST00000205694 CenpbP27790 599 aa19.57■□□□□ 0.72
Rnf40-202ENSMUST00000205694 Baz1aO88379 1555 aa19.53■□□□□ 0.72
Rnf40-202ENSMUST00000205694 ScribQ80U72 1612 aa19.45■□□□□ 0.7
Rnf40-202ENSMUST00000205694 Il27Q8K3I6 234 aa19.42■□□□□ 0.7
Rnf40-202ENSMUST00000205694 Slc24a1Q91WD8 1130 aa19.41■□□□□ 0.7
Rnf40-202ENSMUST00000205694 Brd4Q9ESU6 1400 aaKnown RBP19.38■□□□□ 0.69
Rnf40-202ENSMUST00000205694 HrcG5E8J6 738 aa19.37■□□□□ 0.69
Rnf40-202ENSMUST00000205694 Amer1Q7TS75 1132 aa19.35■□□□□ 0.69
Rnf40-202ENSMUST00000205694 Sycp2Q9CUU3 1500 aa19.28■□□□□ 0.68
Rnf40-202ENSMUST00000205694 Anp32bQ9EST5 272 aaKnown RBP19.17■□□□□ 0.66
Rnf40-202ENSMUST00000205694 Cdk11bP24788 784 aaKnown RBP19.16■□□□□ 0.66
Rnf40-202ENSMUST00000205694 Fam50aQ9WV03 339 aaKnown RBP19.13■□□□□ 0.65
Rnf40-202ENSMUST00000205694 NrdcQ8BHG1 1161 aa19.11■□□□□ 0.65
Rnf40-202ENSMUST00000205694 Npm1Q61937 292 aaKnown RBP19.09■□□□□ 0.65
Rnf40-202ENSMUST00000205694 Ercc6F8VPZ5 1481 aa19.07■□□□□ 0.64
Rnf40-202ENSMUST00000205694 Ap3b1Q9Z1T1 1105 aa19.04■□□□□ 0.64
Rnf40-202ENSMUST00000205694 Crybg2B7ZCC2 1516 aa19.04■□□□□ 0.64
Rnf40-202ENSMUST00000205694 Neurod1Q60867 357 aa19.02■□□□□ 0.64
Rnf40-202ENSMUST00000205694 NclP09405 707 aaKnown RBP19.02■□□□□ 0.64
Rnf40-202ENSMUST00000205694 Pds5bQ4VA53 1446 aaKnown RBP19.02■□□□□ 0.64
Rnf40-202ENSMUST00000205694 Os9Q8K2C7 672 aa18.97■□□□□ 0.63
Rnf40-202ENSMUST00000205694 Ubl4bQ9CQ84 188 aa18.97■□□□□ 0.63
Rnf40-202ENSMUST00000205694 Tnnt3Q9QZ47 272 aa18.96■□□□□ 0.63
Rnf40-202ENSMUST00000205694 NeflP08551 543 aa18.92■□□□□ 0.62
Rnf40-202ENSMUST00000205694 Nop58Q6DFW4 536 aaKnown RBP18.91■□□□□ 0.62
Rnf40-202ENSMUST00000205694 Pcgf6Q99NA9 353 aa18.87■□□□□ 0.61
Rnf40-202ENSMUST00000205694 Eif5bQ05D44 1216 aaKnown RBP18.79■□□□□ 0.6
Rnf40-202ENSMUST00000205694 4930567H17RikQ3V0K5 233 aa18.79■□□□□ 0.6
Rnf40-202ENSMUST00000205694 TonslQ6NZL6 1363 aa18.77■□□□□ 0.6
Rnf40-202ENSMUST00000205694 4933416C03RikQ3V063 378 aa18.77■□□□□ 0.59
Rnf40-202ENSMUST00000205694 Ttbk1Q6PCN3 1308 aa18.73■□□□□ 0.59
Rnf40-202ENSMUST00000205694 Rsf1E9PWW9 1441 aaKnown RBP18.71■□□□□ 0.59
Rnf40-202ENSMUST00000205694 Ppargc1bQ8VHJ7 1014 aa18.71■□□□□ 0.59
Rnf40-202ENSMUST00000205694 Myt1Q8CFC2 1127 aa18.68■□□□□ 0.58
Rnf40-202ENSMUST00000205694 Smarca2Q6DIC0 1577 aa18.65■□□□□ 0.58
Rnf40-202ENSMUST00000205694 Golga3P55937 1487 aa18.65■□□□□ 0.58
Rnf40-202ENSMUST00000205694 Atad2bE9Q166 1460 aaKnown RBP18.64■□□□□ 0.57
Rnf40-202ENSMUST00000205694 Kif15Q6P9L6 1387 aa18.62■□□□□ 0.57
Rnf40-202ENSMUST00000205694 Smarca4Q3TKT4 1613 aaKnown RBP18.58■□□□□ 0.56
Rnf40-202ENSMUST00000205694 Mier1Q5UAK0 511 aa18.56■□□□□ 0.56
Rnf40-202ENSMUST00000205694 Supt5hO55201 1082 aaKnown RBP18.55■□□□□ 0.56
Rnf40-202ENSMUST00000205694 Cep164Q5DU05 1446 aa18.55■□□□□ 0.56
Rnf40-202ENSMUST00000205694 Lmod2Q3UHZ5 550 aa18.54■□□□□ 0.56
Rnf40-202ENSMUST00000205694 Zbtb7cQ8VCZ7 619 aa18.51■□□□□ 0.55
Rnf40-202ENSMUST00000205694 Cecr2E9Q2Z1 1453 aa18.51■□□□□ 0.55
Rnf40-202ENSMUST00000205694 Ccdc18Q640L5 1455 aa18.5■□□□□ 0.55
Rnf40-202ENSMUST00000205694 Chic1Q8CBW7 227 aa18.5■□□□□ 0.55
Rnf40-202ENSMUST00000205694 Hnrnpul2Q00PI9 745 aaKnown RBP18.49■□□□□ 0.55
Rnf40-202ENSMUST00000205694 CftrP26361 1476 aa18.45■□□□□ 0.54
Rnf40-202ENSMUST00000205694 Plekhg3Q4VAC9 1341 aa18.43■□□□□ 0.54
Rnf40-202ENSMUST00000205694 Gm13697A2AK42 830 aa18.43■□□□□ 0.54
Rnf40-202ENSMUST00000205694 Rtl5Q5DTT4 599 aa18.41■□□□□ 0.54
Rnf40-202ENSMUST00000205694 Phldb1Q6PDH0 1371 aaKnown RBP18.39■□□□□ 0.54
Rnf40-202ENSMUST00000205694 Iqgap2Q3UQ44 1575 aa18.36■□□□□ 0.53
Rnf40-202ENSMUST00000205694 Synj1Q8CHC4 1574 aa18.35■□□□□ 0.53
Rnf40-202ENSMUST00000205694 Cttnbp2B9EJA2 1648 aa18.35■□□□□ 0.53
Rnf40-202ENSMUST00000205694 ClspnQ80YR7 1315 aa18.34■□□□□ 0.53
Rnf40-202ENSMUST00000205694 BicraF8VPZ9 1578 aa18.29■□□□□ 0.52
Rnf40-202ENSMUST00000205694 Ifnlr1Q8CGK5 535 aa18.29■□□□□ 0.52
Rnf40-202ENSMUST00000205694 Fmn1Q05860 1466 aa18.26■□□□□ 0.51
Rnf40-202ENSMUST00000205694 Erich6D3Z6S9 713 aa18.25■□□□□ 0.51
Rnf40-202ENSMUST00000205694 Hdac5Q9Z2V6 1113 aa18.25■□□□□ 0.51
Rnf40-202ENSMUST00000205694 Zbtb4Q5F293 982 aa18.23■□□□□ 0.51
Rnf40-202ENSMUST00000205694 Atp1b4Q99ME6 356 aa18.23■□□□□ 0.51
Rnf40-202ENSMUST00000205694 Nlrp6Q91WS2 869 aa18.23■□□□□ 0.51
Rnf40-202ENSMUST00000205694 Anp32aO35381 247 aa18.17■□□□□ 0.5
Rnf40-202ENSMUST00000205694 Cux2P70298 1426 aa18.16■□□□□ 0.5
Rnf40-202ENSMUST00000205694 Clip1Q922J3 1391 aa18.14■□□□□ 0.49
Rnf40-202ENSMUST00000205694 Eid3Q3V124 375 aa18.13■□□□□ 0.49
Rnf40-202ENSMUST00000205694 Gm13695A2AK44 830 aa18.11■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 7.6 ms