RNA–Protein interactions for RNA: ENSMUST00000121963.2

Col6a4-201, Transcript of Collagen alpha-4(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a4, Length 7,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4-201ENSMUST00000121963 Dcaf1Q80TR8 1506 aa13.96□□□□□ -0.17
Col6a4-201ENSMUST00000121963 Paf1Q8K2T8 535 aa13.95□□□□□ -0.18
Col6a4-201ENSMUST00000121963 Spag9Q58A65 1321 aaKnown RBP13.95□□□□□ -0.18
Col6a4-201ENSMUST00000121963 Gtf2e1Q9D0D5 440 aa13.95□□□□□ -0.18
Col6a4-201ENSMUST00000121963 Eea1Q8BL66 1411 aa13.94□□□□□ -0.18
Col6a4-201ENSMUST00000121963 Kif27Q7M6Z4 1394 aa13.94□□□□□ -0.18
Col6a4-201ENSMUST00000121963 Senp3Q9EP97 568 aaKnown RBP13.94□□□□□ -0.18
Col6a4-201ENSMUST00000121963 Kif3bQ61771 747 aa13.93□□□□□ -0.18
Col6a4-201ENSMUST00000121963 Sugp2Q8CH09 1067 aa13.93□□□□□ -0.18
Col6a4-201ENSMUST00000121963 Map4P27546 1125 aaKnown RBP13.93□□□□□ -0.18
Col6a4-201ENSMUST00000121963 Ifit1bl1D3Z6F0 470 aa13.93□□□□□ -0.18
Col6a4-201ENSMUST00000121963 Atf3Q60765 181 aa13.93□□□□□ -0.18
Col6a4-201ENSMUST00000121963 Hs1bp3Q3TC93 395 aa13.92□□□□□ -0.18
Col6a4-201ENSMUST00000121963 MccE9PWI3 1003 aa13.91□□□□□ -0.18
Col6a4-201ENSMUST00000121963 ArsiQ32KI9 573 aa13.91□□□□□ -0.18
Col6a4-201ENSMUST00000121963 Trim44Q9QXA7 346 aa13.91□□□□□ -0.18
Col6a4-201ENSMUST00000121963 Sart3Q9JLI8 962 aaKnown RBP13.9□□□□□ -0.18
Col6a4-201ENSMUST00000121963 Egfem1Q8C088 590 aa13.9□□□□□ -0.18
Col6a4-201ENSMUST00000121963 Ofd1Q80Z25 1017 aa13.89□□□□□ -0.19
Col6a4-201ENSMUST00000121963 Cwc22Q8C5N3 908 aaKnown RBP13.89□□□□□ -0.19
Col6a4-201ENSMUST00000121963 Map7O88735 730 aa13.88□□□□□ -0.19
Col6a4-201ENSMUST00000121963 Sirt1Q923E4 737 aa13.88□□□□□ -0.19
Col6a4-201ENSMUST00000121963 Shroom4Q1W617 1475 aa13.87□□□□□ -0.19
Col6a4-201ENSMUST00000121963 Ppm1gQ61074 542 aa13.87□□□□□ -0.19
Col6a4-201ENSMUST00000121963 Plcb2A3KGF7 1181 aa13.87□□□□□ -0.19
Col6a4-201ENSMUST00000121963 MecomP14404 1042 aa13.86□□□□□ -0.19
Col6a4-201ENSMUST00000121963 Klf15Q9EPW2 415 aa13.86□□□□□ -0.19
Col6a4-201ENSMUST00000121963 Pibf1E9Q6K3 756 aa13.85□□□□□ -0.19
Col6a4-201ENSMUST00000121963 Dhx16G3X8X0 1044 aaKnown RBP13.85□□□□□ -0.19
Col6a4-201ENSMUST00000121963 Fhad1A6PWD2 1420 aa13.85□□□□□ -0.19
Col6a4-201ENSMUST00000121963 Dbr1Q923B1 550 aa13.85□□□□□ -0.19
Col6a4-201ENSMUST00000121963 Cabp4Q8VHC5 271 aa13.85□□□□□ -0.19
Col6a4-201ENSMUST00000121963 Dmrt2Q8BG36 561 aa13.84□□□□□ -0.19
Col6a4-201ENSMUST00000121963 Wwc2Q6NXJ0 1187 aa13.83□□□□□ -0.19
Col6a4-201ENSMUST00000121963 Casc1Q6TDU8 730 aa13.83□□□□□ -0.2
Col6a4-201ENSMUST00000121963 Eva1cP58659 440 aa13.83□□□□□ -0.2
Col6a4-201ENSMUST00000121963 Fyb1O35601 819 aa13.82□□□□□ -0.2
Col6a4-201ENSMUST00000121963 HnrnpuQ8VEK3 800 aaKnown RBP13.82□□□□□ -0.2
Col6a4-201ENSMUST00000121963 Utp14aQ640M1 767 aaKnown RBP13.82□□□□□ -0.2
Col6a4-201ENSMUST00000121963 Tpm3-rs7D3Z2H9 248 aa13.81□□□□□ -0.2
Col6a4-201ENSMUST00000121963 Tmco5bQ80X59 307 aa13.81□□□□□ -0.2
Col6a4-201ENSMUST00000121963 Zpr1Q62384 459 aa13.81□□□□□ -0.2
Col6a4-201ENSMUST00000121963 Iffo2Q8R2V2 512 aa13.81□□□□□ -0.2
Col6a4-201ENSMUST00000121963 MycnP03966 462 aaKnown RBP13.8□□□□□ -0.2
Col6a4-201ENSMUST00000121963 U2af1Q9D883 239 aaKnown RBP13.8□□□□□ -0.2
Col6a4-201ENSMUST00000121963 Kri1Q8VDQ9 704 aaKnown RBP13.8□□□□□ -0.2
Col6a4-201ENSMUST00000121963 Ddx54Q8K4L0 874 aaKnown RBP13.79□□□□□ -0.2
Col6a4-201ENSMUST00000121963 Pde3bQ61409 1100 aa13.79□□□□□ -0.2
Col6a4-201ENSMUST00000121963 Baz1aO88379 1555 aa13.79□□□□□ -0.2
Col6a4-201ENSMUST00000121963 CanxP35564 591 aaKnown RBP13.78□□□□□ -0.2
Col6a4-201ENSMUST00000121963 Ddx11Q6AXC6 880 aa13.78□□□□□ -0.2
Col6a4-201ENSMUST00000121963 Golga3P55937 1487 aa13.78□□□□□ -0.2
Col6a4-201ENSMUST00000121963 AppP12023 770 aa13.77□□□□□ -0.2
Col6a4-201ENSMUST00000121963 Wdr43Q6ZQL4 677 aaKnown RBP13.77□□□□□ -0.2
Col6a4-201ENSMUST00000121963 Pcmtd1P59913 357 aa13.77□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Brpf1B2RRD7 1212 aa13.77□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Mical1Q8VDP3 1048 aa13.77□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Evi5lH3BKQ3 813 aa13.76□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Chmp7Q8R1T1 451 aa13.76□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Rbm5Q91YE7 815 aaKnown RBP13.76□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Kif7B7ZNG0 1348 aa13.75□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Plagl1Q9JLQ4 704 aa13.75□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Tmf1B9EKI3 1091 aa13.75□□□□□ -0.21
Col6a4-201ENSMUST00000121963 KnstrnQ9D9Z1 312 aaKnown RBP13.75□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Baz1bQ9Z277 1479 aa13.74□□□□□ -0.21
Col6a4-201ENSMUST00000121963 CenpjQ569L8 1344 aa13.74□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Dcaf11Q91VU6 549 aa13.73□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Ccdc47Q9D024 483 aaKnown RBP13.73□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Gm21190A0A0G2JGJ6 266 aa13.73□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Rundc1Q0VDN7 615 aa13.73□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Znf330Q922H9 316 aa13.73□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Sytl4Q9R0Q1 673 aa13.73□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Shq1Q7TMX5 569 aa13.72□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Ripply1Q2WG77 201 aa13.71□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Trak1Q6PD31 939 aa13.71□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Cux2P70298 1426 aa13.71□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Slc4a10Q5DTL9 1118 aa13.71□□□□□ -0.21
Col6a4-201ENSMUST00000121963 Soga1E1U8D0 1418 aa13.7□□□□□ -0.22
Col6a4-201ENSMUST00000121963 Dhx57Q6P5D3 1388 aaKnown RBP13.7□□□□□ -0.22
Col6a4-201ENSMUST00000121963 Smc4Q8CG47 1286 aa13.7□□□□□ -0.22
Col6a4-201ENSMUST00000121963 Odf2A3KGV1 830 aaKnown RBP13.7□□□□□ -0.22
Col6a4-201ENSMUST00000121963 Mia2Q91ZV0 1396 aa13.7□□□□□ -0.22
Col6a4-201ENSMUST00000121963 Speer4f1Q9D5Q6 258 aa13.69□□□□□ -0.22
Col6a4-201ENSMUST00000121963 Aebp1Q640N1 1128 aa13.69□□□□□ -0.22
Col6a4-201ENSMUST00000121963 Fan1Q69ZT1 1020 aa13.69□□□□□ -0.22
Col6a4-201ENSMUST00000121963 CgnP59242 1191 aa13.68□□□□□ -0.22
Col6a4-201ENSMUST00000121963 Kdm5dQ62240 1548 aa13.68□□□□□ -0.22
Col6a4-201ENSMUST00000121963 BcanQ61361 883 aa13.67□□□□□ -0.22
Col6a4-201ENSMUST00000121963 Tpd52l1O54818 204 aa13.67□□□□□ -0.22
Col6a4-201ENSMUST00000121963 Rock2P70336 1388 aa13.66□□□□□ -0.22
Col6a4-201ENSMUST00000121963 Tcerg1Q8CGF7 1100 aaKnown RBP13.65□□□□□ -0.22
Col6a4-201ENSMUST00000121963 Stk31Q99MW1 1018 aa13.65□□□□□ -0.22
Col6a4-201ENSMUST00000121963 Ncbp3Q8BZR9 615 aaKnown RBP13.65□□□□□ -0.22
Col6a4-201ENSMUST00000121963 Krt82Q99M74 516 aa13.65□□□□□ -0.22
Col6a4-201ENSMUST00000121963 Nup155Q99P88 1391 aaKnown RBP13.65□□□□□ -0.22
Col6a4-201ENSMUST00000121963 AcrbpQ3V140 540 aa13.65□□□□□ -0.22
Col6a4-201ENSMUST00000121963 Pkd2O35245 966 aa13.64□□□□□ -0.23
Col6a4-201ENSMUST00000121963 Sall2Q9QX96 1004 aa13.63□□□□□ -0.23
Col6a4-201ENSMUST00000121963 Sart1Q9Z315 806 aaKnown RBP13.63□□□□□ -0.23
Col6a4-201ENSMUST00000121963 Gm973E9Q295 1059 aa13.62□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 177.7 ms