Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Gm25239-201ENSMUST00000174915 86 ntBASIC47.44■■■■■ 5.18
Smc4Q8CG47 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC43.77■■■■■ 4.6
Smc4Q8CG47 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC43.28■■■■■ 4.52
Smc4Q8CG47 Gm15042-201ENSMUST00000120212 883 ntBASIC41.65■■■■■ 4.26
Smc4Q8CG47 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC41.37■■■■■ 4.21
Smc4Q8CG47 Gm24109-201ENSMUST00000175489 103 ntBASIC40.98■■■■■ 4.15
Smc4Q8CG47 Gm15045-201ENSMUST00000117359 883 ntBASIC40.7■■■■■ 4.11
Smc4Q8CG47 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40.66■■■■■ 4.1
Smc4Q8CG47 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC40.4■■■■■ 4.06
Smc4Q8CG47 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC40.11■■■■■ 4.01
Smc4Q8CG47 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC40.05■■■■■ 4
Smc4Q8CG47 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC39.92■■■■□ 3.98
Smc4Q8CG47 Gm23366-201ENSMUST00000175022 89 ntBASIC39.71■■■■□ 3.95
Smc4Q8CG47 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC39.46■■■■□ 3.91
Smc4Q8CG47 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
Smc4Q8CG47 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
Smc4Q8CG47 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38.8■■■■□ 3.8
Smc4Q8CG47 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38.6■■■■□ 3.77
Smc4Q8CG47 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC38.47■■■■□ 3.75
Smc4Q8CG47 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
Smc4Q8CG47 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC38.33■■■■□ 3.73
Smc4Q8CG47 AC153911.1-202ENSMUST00000218534 1034 ntBASIC38.21■■■■□ 3.71
Smc4Q8CG47 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
Smc4Q8CG47 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC38.14■■■■□ 3.7
Smc4Q8CG47 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38.11■■■■□ 3.69
Smc4Q8CG47 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC38.11■■■■□ 3.69
Smc4Q8CG47 Psd-208ENSMUST00000224556 2034 ntBASIC38.11■■■■□ 3.69
Smc4Q8CG47 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.96■■■■□ 3.67
Smc4Q8CG47 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37.94■■■■□ 3.66
Smc4Q8CG47 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37.79■■■■□ 3.64
Smc4Q8CG47 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37.76■■■■□ 3.64
Smc4Q8CG47 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
Smc4Q8CG47 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
Smc4Q8CG47 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
Smc4Q8CG47 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC37.45■■■■□ 3.59
Smc4Q8CG47 Gm25238-201ENSMUST00000174914 89 ntBASIC37.37■■■■□ 3.57
Smc4Q8CG47 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC37.36■■■■□ 3.57
Smc4Q8CG47 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
Smc4Q8CG47 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
Smc4Q8CG47 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.52
Smc4Q8CG47 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36.99■■■■□ 3.51
Smc4Q8CG47 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
Smc4Q8CG47 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC36.76■■■■□ 3.48
Smc4Q8CG47 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36.71■■■■□ 3.47
Smc4Q8CG47 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC36.64■■■■□ 3.46
Smc4Q8CG47 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
Smc4Q8CG47 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
Smc4Q8CG47 Gm27325-201ENSMUST00000175467 74 ntBASIC36.53■■■■□ 3.44
Smc4Q8CG47 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
Smc4Q8CG47 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36.39■■■■□ 3.42
Smc4Q8CG47 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC36.37■■■■□ 3.41
Smc4Q8CG47 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
Smc4Q8CG47 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36.28■■■■□ 3.4
Smc4Q8CG47 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC36.23■■■■□ 3.39
Smc4Q8CG47 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC36.22■■■■□ 3.39
Smc4Q8CG47 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC36.12■■■■□ 3.37
Smc4Q8CG47 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
Smc4Q8CG47 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Smc4Q8CG47 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.98■■■■□ 3.35
Smc4Q8CG47 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Smc4Q8CG47 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.85■■■■□ 3.33
Smc4Q8CG47 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Smc4Q8CG47 Gm25262-201ENSMUST00000174934 133 ntBASIC35.81■■■■□ 3.32
Smc4Q8CG47 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Smc4Q8CG47 Rab21-202ENSMUST00000218831 843 ntBASIC35.79■■■■□ 3.32
Smc4Q8CG47 Gm10524-201ENSMUST00000181931 1893 ntBASIC35.75■■■■□ 3.31
Smc4Q8CG47 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Smc4Q8CG47 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Smc4Q8CG47 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35.72■■■■□ 3.31
Smc4Q8CG47 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35.7■■■■□ 3.31
Smc4Q8CG47 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC35.66■■■■□ 3.3
Smc4Q8CG47 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
Smc4Q8CG47 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35.57■■■■□ 3.28
Smc4Q8CG47 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Smc4Q8CG47 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35.53■■■■□ 3.28
Smc4Q8CG47 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35.52■■■■□ 3.28
Smc4Q8CG47 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
Smc4Q8CG47 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Smc4Q8CG47 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35.34■■■■□ 3.25
Smc4Q8CG47 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC35.33■■■■□ 3.25
Smc4Q8CG47 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC35.26■■■■□ 3.24
Smc4Q8CG47 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Smc4Q8CG47 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC35.24■■■■□ 3.23
Smc4Q8CG47 Gm42596-201ENSMUST00000196305 1958 ntBASIC35.2■■■■□ 3.22
Smc4Q8CG47 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
Smc4Q8CG47 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
Smc4Q8CG47 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC35.16■■■■□ 3.22
Smc4Q8CG47 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Smc4Q8CG47 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC35.06■■■■□ 3.2
Smc4Q8CG47 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Smc4Q8CG47 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC35.05■■■■□ 3.2
Smc4Q8CG47 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Smc4Q8CG47 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34.99■■■■□ 3.19
Smc4Q8CG47 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34.98■■■■□ 3.19
Smc4Q8CG47 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.19
Smc4Q8CG47 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34.93■■■■□ 3.18
Smc4Q8CG47 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34.87■■■■□ 3.17
Smc4Q8CG47 Gm26115-201ENSMUST00000175605 87 ntBASIC34.84■■■■□ 3.17
Smc4Q8CG47 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Smc4Q8CG47 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC34.78■■■■□ 3.16
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms