RNA–Protein interactions for RNA: ENSMUST00000121963.2

Col6a4-201, Transcript of Collagen alpha-4(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a4, Length 7,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4-201ENSMUST00000121963 Rhox8Q6VSS7 320 aa19.65■□□□□ 0.74
Col6a4-201ENSMUST00000121963 Esf1Q3V1V3 845 aaKnown RBP17.79■□□□□ 0.44
Col6a4-201ENSMUST00000121963 Ube2uB1AUC4 352 aa17.69■□□□□ 0.42
Col6a4-201ENSMUST00000121963 Zeb1Q64318 1117 aa17.67■□□□□ 0.42
Col6a4-201ENSMUST00000121963 Cngb1E1AZ71 1325 aa17.55■□□□□ 0.4
Col6a4-201ENSMUST00000121963 Npm2Q80W85 207 aa17.31■□□□□ 0.36
Col6a4-201ENSMUST00000121963 Ccdc136Q3TVA9 1136 aa17.29■□□□□ 0.36
Col6a4-201ENSMUST00000121963 Ehmt2Q9Z148 1263 aaKnown RBP17.18■□□□□ 0.34
Col6a4-201ENSMUST00000121963 Myt1lP97500 1187 aa17.03■□□□□ 0.32
Col6a4-201ENSMUST00000121963 Gab3Q8BSM5 595 aa17.01■□□□□ 0.31
Col6a4-201ENSMUST00000121963 Wdr66E9Q743 1299 aa16.95■□□□□ 0.3
Col6a4-201ENSMUST00000121963 Las1lA2BE28 776 aaKnown RBP16.91■□□□□ 0.3
Col6a4-201ENSMUST00000121963 Trim41Q5NCC3 630 aa16.75■□□□□ 0.27
Col6a4-201ENSMUST00000121963 Il27Q8K3I6 234 aa16.68■□□□□ 0.26
Col6a4-201ENSMUST00000121963 Pelp1Q9DBD5 1123 aaKnown RBP16.64■□□□□ 0.25
Col6a4-201ENSMUST00000121963 Os9Q8K2C7 672 aa16.43■□□□□ 0.22
Col6a4-201ENSMUST00000121963 Rpgrip1Q9EPQ2 1331 aa16.42■□□□□ 0.22
Col6a4-201ENSMUST00000121963 Slc24a1Q91WD8 1130 aa16.37■□□□□ 0.21
Col6a4-201ENSMUST00000121963 Plppr3Q7TPB0 716 aa16.33■□□□□ 0.21
Col6a4-201ENSMUST00000121963 Gm13697A2AK42 830 aa16.33■□□□□ 0.2
Col6a4-201ENSMUST00000121963 Ifnlr1Q8CGK5 535 aa16.3■□□□□ 0.2
Col6a4-201ENSMUST00000121963 UbtfP25976 765 aaKnown RBP16.25■□□□□ 0.19
Col6a4-201ENSMUST00000121963 Gm35339A0A140LHH9 1649 aa16.24■□□□□ 0.19
Col6a4-201ENSMUST00000121963 Ttbk1Q6PCN3 1308 aa16.23■□□□□ 0.19
Col6a4-201ENSMUST00000121963 HrcG5E8J6 738 aa16.23■□□□□ 0.19
Col6a4-201ENSMUST00000121963 NischQ80TM9 1593 aa16.21■□□□□ 0.18
Col6a4-201ENSMUST00000121963 Ap3b1Q9Z1T1 1105 aa16.2■□□□□ 0.18
Col6a4-201ENSMUST00000121963 Abcc9P70170 1546 aa16.16■□□□□ 0.18
Col6a4-201ENSMUST00000121963 Neurod1Q60867 357 aa16.11■□□□□ 0.17
Col6a4-201ENSMUST00000121963 Zbtb7cQ8VCZ7 619 aa16.08■□□□□ 0.16
Col6a4-201ENSMUST00000121963 Chic1Q8CBW7 227 aa16.03■□□□□ 0.16
Col6a4-201ENSMUST00000121963 Fam50aQ9WV03 339 aaKnown RBP16.01■□□□□ 0.15
Col6a4-201ENSMUST00000121963 Atp1b4Q99ME6 356 aa15.97■□□□□ 0.15
Col6a4-201ENSMUST00000121963 Gm13695A2AK44 830 aa15.94■□□□□ 0.14
Col6a4-201ENSMUST00000121963 Amer1Q7TS75 1132 aa15.94■□□□□ 0.14
Col6a4-201ENSMUST00000121963 Anp32bQ9EST5 272 aaKnown RBP15.92■□□□□ 0.14
Col6a4-201ENSMUST00000121963 Hnrnpul2Q00PI9 745 aaKnown RBP15.91■□□□□ 0.14
Col6a4-201ENSMUST00000121963 NclP09405 707 aaKnown RBP15.9■□□□□ 0.14
Col6a4-201ENSMUST00000121963 Npm1Q61937 292 aaKnown RBP15.89■□□□□ 0.13
Col6a4-201ENSMUST00000121963 Stra8P70278 393 aa15.85■□□□□ 0.13
Col6a4-201ENSMUST00000121963 Zcchc6Q5BLK4 1491 aaKnown RBP15.81■□□□□ 0.12
Col6a4-201ENSMUST00000121963 DiexfQ8BTT6 772 aaKnown RBP15.8■□□□□ 0.12
Col6a4-201ENSMUST00000121963 Erich6D3Z6S9 713 aa15.77■□□□□ 0.12
Col6a4-201ENSMUST00000121963 NrdcQ8BHG1 1161 aa15.74■□□□□ 0.11
Col6a4-201ENSMUST00000121963 Safb2Q80YR5 991 aaKnown RBP15.73■□□□□ 0.11
Col6a4-201ENSMUST00000121963 Fkbp15Q6P9Q6 1216 aaKnown RBP15.71■□□□□ 0.11
Col6a4-201ENSMUST00000121963 NeflP08551 543 aa15.65■□□□□ 0.1
Col6a4-201ENSMUST00000121963 Eif5bQ05D44 1216 aaKnown RBP15.59■□□□□ 0.09
Col6a4-201ENSMUST00000121963 Zbtb4Q5F293 982 aa15.57■□□□□ 0.08
Col6a4-201ENSMUST00000121963 Prdm10Q3UTQ7 1184 aa15.56■□□□□ 0.08
Col6a4-201ENSMUST00000121963 Lmod2Q3UHZ5 550 aa15.53■□□□□ 0.08
Col6a4-201ENSMUST00000121963 NefmP08553 848 aa15.52■□□□□ 0.08
Col6a4-201ENSMUST00000121963 4930567H17RikQ3V0K5 233 aa15.51■□□□□ 0.07
Col6a4-201ENSMUST00000121963 Acin1Q9JIX8 1338 aaKnown RBP15.43■□□□□ 0.06
Col6a4-201ENSMUST00000121963 Nlrp6Q91WS2 869 aa15.42■□□□□ 0.06
Col6a4-201ENSMUST00000121963 Ubl4bQ9CQ84 188 aa15.38■□□□□ 0.05
Col6a4-201ENSMUST00000121963 Polr3glQ8R0C0 218 aa15.34■□□□□ 0.05
Col6a4-201ENSMUST00000121963 MyclP10166 368 aa15.33■□□□□ 0.04
Col6a4-201ENSMUST00000121963 P3h3Q8CG70 732 aa15.33■□□□□ 0.04
Col6a4-201ENSMUST00000121963 4933416C03RikQ3V063 378 aa15.32■□□□□ 0.04
Col6a4-201ENSMUST00000121963 Rtl1Q7M732 1744 aa15.32■□□□□ 0.04
Col6a4-201ENSMUST00000121963 Ccdc180J3QNE4 1664 aa15.32■□□□□ 0.04
Col6a4-201ENSMUST00000121963 Cdk11bP24788 784 aaKnown RBP15.29■□□□□ 0.04
Col6a4-201ENSMUST00000121963 CenpbP27790 599 aa15.29■□□□□ 0.04
Col6a4-201ENSMUST00000121963 Hdac5Q9Z2V6 1113 aa15.27■□□□□ 0.04
Col6a4-201ENSMUST00000121963 Ppargc1bQ8VHJ7 1014 aa15.24■□□□□ 0.03
Col6a4-201ENSMUST00000121963 Rangap1P46061 589 aaKnown RBP15.17■□□□□ 0.02
Col6a4-201ENSMUST00000121963 Plekhg3Q4VAC9 1341 aa15.14■□□□□ 0.01
Col6a4-201ENSMUST00000121963 TonslQ6NZL6 1363 aa15.09■□□□□ 0.01
Col6a4-201ENSMUST00000121963 Ggt6Q6PDE7 497 aa15.02■□□□□ -0
Col6a4-201ENSMUST00000121963 Irx6Q9ER75 438 aa15.02□□□□□ -0.01
Col6a4-201ENSMUST00000121963 Znf326O88291 580 aa14.99□□□□□ -0.01
Col6a4-201ENSMUST00000121963 Ppp1r18Q8BQ30 594 aa14.96□□□□□ -0.01
Col6a4-201ENSMUST00000121963 Tnnt3Q9QZ47 272 aa14.92□□□□□ -0.02
Col6a4-201ENSMUST00000121963 ArxO35085 564 aa14.9□□□□□ -0.02
Col6a4-201ENSMUST00000121963 MlecQ6ZQI3 291 aaKnown RBP14.9□□□□□ -0.02
Col6a4-201ENSMUST00000121963 NgefQ8CHT1 710 aa14.89□□□□□ -0.03
Col6a4-201ENSMUST00000121963 Nop58Q6DFW4 536 aaKnown RBP14.86□□□□□ -0.03
Col6a4-201ENSMUST00000121963 Ythdc1E9Q5K9 736 aaKnown RBP14.86□□□□□ -0.03
Col6a4-201ENSMUST00000121963 Rtn4Q99P72 1162 aaKnown RBP14.85□□□□□ -0.03
Col6a4-201ENSMUST00000121963 Hsp90aa1P07901 733 aaKnown RBP14.84□□□□□ -0.03
Col6a4-201ENSMUST00000121963 Fgd1P52734 960 aa14.81□□□□□ -0.04
Col6a4-201ENSMUST00000121963 Chic2Q9D9G3 165 aa14.79□□□□□ -0.04
Col6a4-201ENSMUST00000121963 Arhgap27A2AB59 869 aa14.78□□□□□ -0.04
Col6a4-201ENSMUST00000121963 Q8BT18 775 aa14.77□□□□□ -0.04
Col6a4-201ENSMUST00000121963 Clstn2Q9ER65 966 aa14.76□□□□□ -0.05
Col6a4-201ENSMUST00000121963 Clstn1Q9EPL2 979 aa14.75□□□□□ -0.05
Col6a4-201ENSMUST00000121963 Aplp2Q06335 707 aa14.74□□□□□ -0.05
Col6a4-201ENSMUST00000121963 Ercc6F8VPZ5 1481 aa14.74□□□□□ -0.05
Col6a4-201ENSMUST00000121963 IqubQ8CDK3 788 aa14.74□□□□□ -0.05
Col6a4-201ENSMUST00000121963 Mapk8ip2Q9ERE9 830 aa14.73□□□□□ -0.05
Col6a4-201ENSMUST00000121963 Ppm1fQ8CGA0 452 aa14.72□□□□□ -0.05
Col6a4-201ENSMUST00000121963 Ecm2Q5FW85 670 aa14.71□□□□□ -0.05
Col6a4-201ENSMUST00000121963 Ubap1lG3UW59 384 aa14.71□□□□□ -0.06
Col6a4-201ENSMUST00000121963 Mier1Q5UAK0 511 aa14.71□□□□□ -0.06
Col6a4-201ENSMUST00000121963 Trim26Q99PN3 545 aa14.68□□□□□ -0.06
Col6a4-201ENSMUST00000121963 Brd4Q9ESU6 1400 aaKnown RBP14.68□□□□□ -0.06
Col6a4-201ENSMUST00000121963 Clip1Q922J3 1391 aa14.67□□□□□ -0.06
Col6a4-201ENSMUST00000121963 Rad21Q61550 635 aaKnown RBP14.64□□□□□ -0.07
Col6a4-201ENSMUST00000121963 Eid3Q3V124 375 aa14.64□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 252.7 ms