Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm25239-201ENSMUST00000174915 86 ntBASIC53.99■■■■■ 6.23
Ddx54Q8K4L0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC50.33■■■■■ 5.65
Ddx54Q8K4L0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC49.51■■■■■ 5.52
Ddx54Q8K4L0 Gm24109-201ENSMUST00000175489 103 ntBASIC47.24■■■■■ 5.15
Ddx54Q8K4L0 Gm15042-201ENSMUST00000120212 883 ntBASIC46.36■■■■■ 5.01
Ddx54Q8K4L0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC45.65■■■■■ 4.9
Ddx54Q8K4L0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC45.62■■■■■ 4.89
Ddx54Q8K4L0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC45.35■■■■■ 4.85
Ddx54Q8K4L0 Gm15045-201ENSMUST00000117359 883 ntBASIC45.19■■■■■ 4.82
Ddx54Q8K4L0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC45.12■■■■■ 4.81
Ddx54Q8K4L0 Gm23366-201ENSMUST00000175022 89 ntBASIC44.97■■■■■ 4.79
Ddx54Q8K4L0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC44.36■■■■■ 4.69
Ddx54Q8K4L0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC43.95■■■■■ 4.63
Ddx54Q8K4L0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC43.85■■■■■ 4.61
Ddx54Q8K4L0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC43.83■■■■■ 4.61
Ddx54Q8K4L0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC43.77■■■■■ 4.6
Ddx54Q8K4L0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC43.36■■■■■ 4.53
Ddx54Q8K4L0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC43.08■■■■■ 4.49
Ddx54Q8K4L0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC43■■■■■ 4.47
Ddx54Q8K4L0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC42.93■■■■■ 4.46
Ddx54Q8K4L0 Gm25238-201ENSMUST00000174914 89 ntBASIC42.89■■■■■ 4.46
Ddx54Q8K4L0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC42.84■■■■■ 4.45
Ddx54Q8K4L0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC41.99■■■■■ 4.31
Ddx54Q8K4L0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC41.93■■■■■ 4.3
Ddx54Q8K4L0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC41.9■■■■■ 4.3
Ddx54Q8K4L0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC41.79■■■■■ 4.28
Ddx54Q8K4L0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC41.79■■■■■ 4.28
Ddx54Q8K4L0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC41.66■■■■■ 4.26
Ddx54Q8K4L0 Gm25262-201ENSMUST00000174934 133 ntBASIC41.49■■■■■ 4.23
Ddx54Q8K4L0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC41.45■■■■■ 4.23
Ddx54Q8K4L0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC41.32■■■■■ 4.21
Ddx54Q8K4L0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC41.27■■■■■ 4.2
Ddx54Q8K4L0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC41.26■■■■■ 4.19
Ddx54Q8K4L0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC41.06■■■■■ 4.16
Ddx54Q8K4L0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC40.93■■■■■ 4.14
Ddx54Q8K4L0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC40.92■■■■■ 4.14
Ddx54Q8K4L0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC40.91■■■■■ 4.14
Ddx54Q8K4L0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC40.88■■■■■ 4.13
Ddx54Q8K4L0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC40.85■■■■■ 4.13
Ddx54Q8K4L0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC40.85■■■■■ 4.13
Ddx54Q8K4L0 Gm26115-201ENSMUST00000175605 87 ntBASIC40.8■■■■■ 4.12
Ddx54Q8K4L0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC40.8■■■■■ 4.12
Ddx54Q8K4L0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC40.7■■■■■ 4.11
Ddx54Q8K4L0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC40.67■■■■■ 4.1
Ddx54Q8K4L0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC40.61■■■■■ 4.09
Ddx54Q8K4L0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.08
Ddx54Q8K4L0 Gm8109-201ENSMUST00000194076 746 ntBASIC40.48■■■■■ 4.07
Ddx54Q8K4L0 Gm27325-201ENSMUST00000175467 74 ntBASIC40.47■■■■■ 4.07
Ddx54Q8K4L0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC40.45■■■■■ 4.07
Ddx54Q8K4L0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC40.4■■■■■ 4.06
Ddx54Q8K4L0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.05
Ddx54Q8K4L0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC40.28■■■■■ 4.04
Ddx54Q8K4L0 Rab21-202ENSMUST00000218831 843 ntBASIC40.27■■■■■ 4.04
Ddx54Q8K4L0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC40.11■■■■■ 4.01
Ddx54Q8K4L0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC39.97■■■■□ 3.99
Ddx54Q8K4L0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
Ddx54Q8K4L0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.96
Ddx54Q8K4L0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC39.78■■■■□ 3.96
Ddx54Q8K4L0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC39.73■■■■□ 3.95
Ddx54Q8K4L0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC39.62■■■■□ 3.93
Ddx54Q8K4L0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC39.6■■■■□ 3.93
Ddx54Q8K4L0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC39.53■■■■□ 3.92
Ddx54Q8K4L0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
Ddx54Q8K4L0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC39.46■■■■□ 3.91
Ddx54Q8K4L0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC39.39■■■■□ 3.9
Ddx54Q8K4L0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC39.38■■■■□ 3.89
Ddx54Q8K4L0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC39.34■■■■□ 3.89
Ddx54Q8K4L0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC39.25■■■■□ 3.87
Ddx54Q8K4L0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
Ddx54Q8K4L0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC39.23■■■■□ 3.87
Ddx54Q8K4L0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
Ddx54Q8K4L0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC39.1■■■■□ 3.85
Ddx54Q8K4L0 Gm24804-201ENSMUST00000174982 85 ntBASIC39.05■■■■□ 3.84
Ddx54Q8K4L0 Gm17082-201ENSMUST00000166043 1091 ntBASIC39.03■■■■□ 3.84
Ddx54Q8K4L0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC39.02■■■■□ 3.84
Ddx54Q8K4L0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC38.99■■■■□ 3.83
Ddx54Q8K4L0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
Ddx54Q8K4L0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
Ddx54Q8K4L0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC38.76■■■■□ 3.8
Ddx54Q8K4L0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC38.72■■■■□ 3.79
Ddx54Q8K4L0 Gm27322-201ENSMUST00000184007 104 ntBASIC38.65■■■■□ 3.78
Ddx54Q8K4L0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC38.59■■■■□ 3.77
Ddx54Q8K4L0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
Ddx54Q8K4L0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC38.55■■■■□ 3.76
Ddx54Q8K4L0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC38.53■■■■□ 3.76
Ddx54Q8K4L0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC38.53■■■■□ 3.76
Ddx54Q8K4L0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC38.49■■■■□ 3.75
Ddx54Q8K4L0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC38.46■■■■□ 3.75
Ddx54Q8K4L0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC38.44■■■■□ 3.74
Ddx54Q8K4L0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC38.43■■■■□ 3.74
Ddx54Q8K4L0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC38.43■■■■□ 3.74
Ddx54Q8K4L0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC38.4■■■■□ 3.74
Ddx54Q8K4L0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC38.39■■■■□ 3.74
Ddx54Q8K4L0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
Ddx54Q8K4L0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC38.37■■■■□ 3.73
Ddx54Q8K4L0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
Ddx54Q8K4L0 Psd-208ENSMUST00000224556 2034 ntBASIC38.33■■■■□ 3.73
Ddx54Q8K4L0 Zfp131-205ENSMUST00000223812 663 ntBASIC38.32■■■■□ 3.72
Ddx54Q8K4L0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
Ddx54Q8K4L0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms