RNA–Protein interactions for RNA: ENSMUST00000044053.12

Shprh-201, Transcript of E3 ubiquitin-protein ligase SHPRH, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Shprh, Length 9,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shprh-201ENSMUST00000044053 BccipQ9CWI3 316 aa7.79□□□□□ -1.16
Shprh-201ENSMUST00000044053 Rbm10Q99KG3 930 aaKnown RBP7.78□□□□□ -1.16
Shprh-201ENSMUST00000044053 Vgll3P85442 326 aa7.78□□□□□ -1.16
Shprh-201ENSMUST00000044053 Exosc9Q9JHI7 438 aaKnown RBP7.78□□□□□ -1.16
Shprh-201ENSMUST00000044053 NgefQ8CHT1 710 aa7.78□□□□□ -1.16
Shprh-201ENSMUST00000044053 Arhgap27A2AB59 869 aa7.78□□□□□ -1.16
Shprh-201ENSMUST00000044053 Sart3Q9JLI8 962 aaKnown RBP7.77□□□□□ -1.17
Shprh-201ENSMUST00000044053 Stk24Q99KH8 431 aa7.76□□□□□ -1.17
Shprh-201ENSMUST00000044053 Exoc6Q8R313 802 aa7.76□□□□□ -1.17
Shprh-201ENSMUST00000044053 Pcmtd1P59913 357 aa7.75□□□□□ -1.17
Shprh-201ENSMUST00000044053 VgfQ0VGU4 617 aa7.75□□□□□ -1.17
Shprh-201ENSMUST00000044053 Rrp7aQ9D1C9 280 aaKnown RBP7.75□□□□□ -1.17
Shprh-201ENSMUST00000044053 Kiaa0754Q69ZZ9 979 aa7.75□□□□□ -1.17
Shprh-201ENSMUST00000044053 Calcoco2A2A6M5 331 aa7.75□□□□□ -1.17
Shprh-201ENSMUST00000044053 Gm20521D3Z5F7 333 aa7.75□□□□□ -1.17
Shprh-201ENSMUST00000044053 Stard8Q8K031 1019 aa7.75□□□□□ -1.17
Shprh-201ENSMUST00000044053 Chmp5Q9D7S9 219 aa7.75□□□□□ -1.17
Shprh-201ENSMUST00000044053 Clstn1Q9EPL2 979 aa7.75□□□□□ -1.17
Shprh-201ENSMUST00000044053 Gtf3c5Q8R2T8 520 aa7.74□□□□□ -1.17
Shprh-201ENSMUST00000044053 EspnQ9ET47 871 aa7.74□□□□□ -1.17
Shprh-201ENSMUST00000044053 Rundc1Q0VDN7 615 aa7.73□□□□□ -1.17
Shprh-201ENSMUST00000044053 Rrp9Q91WM3 475 aaKnown RBP7.73□□□□□ -1.17
Shprh-201ENSMUST00000044053 Fam13bQ8K2H3 851 aa7.73□□□□□ -1.17
Shprh-201ENSMUST00000044053 Srpk2O54781 681 aaKnown RBP7.72□□□□□ -1.17
Shprh-201ENSMUST00000044053 4933402E13RikQ9D4D2 429 aa7.72□□□□□ -1.17
Shprh-201ENSMUST00000044053 Znf330Q922H9 316 aa7.71□□□□□ -1.17
Shprh-201ENSMUST00000044053 Slc4a1apE9PX68 744 aa7.71□□□□□ -1.17
Shprh-201ENSMUST00000044053 Clstn2Q9ER65 966 aa7.71□□□□□ -1.17
Shprh-201ENSMUST00000044053 Mtus2Q3UHD3 1353 aa7.71□□□□□ -1.17
Shprh-201ENSMUST00000044053 Ccdc18Q640L5 1455 aa7.71□□□□□ -1.17
Shprh-201ENSMUST00000044053 Baz1bQ9Z277 1479 aa7.71□□□□□ -1.17
Shprh-201ENSMUST00000044053 Ddrgk1Q80WW9 315 aa7.71□□□□□ -1.18
Shprh-201ENSMUST00000044053 Safb2Q80YR5 991 aaKnown RBP7.71□□□□□ -1.18
Shprh-201ENSMUST00000044053 Stag3O70576 1240 aa7.71□□□□□ -1.18
Shprh-201ENSMUST00000044053 Cfap65Q3V0B4 1847 aa7.71□□□□□ -1.18
Shprh-201ENSMUST00000044053 AcrbpQ3V140 540 aa7.71□□□□□ -1.18
Shprh-201ENSMUST00000044053 Ipo8Q7TMY7 1010 aa7.71□□□□□ -1.18
Shprh-201ENSMUST00000044053 Cwc22Q8C5N3 908 aaKnown RBP7.71□□□□□ -1.18
Shprh-201ENSMUST00000044053 Rwdd1Q9CQK7 243 aa7.71□□□□□ -1.18
Shprh-201ENSMUST00000044053 Mical3Q8CJ19 1993 aa7.7□□□□□ -1.18
Shprh-201ENSMUST00000044053 Fam43aQ8BUP8 424 aa7.7□□□□□ -1.18
Shprh-201ENSMUST00000044053 DmtnQ9WV69 405 aa7.7□□□□□ -1.18
Shprh-201ENSMUST00000044053 Casc1Q6TDU8 730 aa7.7□□□□□ -1.18
Shprh-201ENSMUST00000044053 Becn1O88597 448 aa7.7□□□□□ -1.18
Shprh-201ENSMUST00000044053 Cluap1Q8R3P7 413 aa7.7□□□□□ -1.18
Shprh-201ENSMUST00000044053 Hsp90b1P08113 802 aaKnown RBP7.7□□□□□ -1.18
Shprh-201ENSMUST00000044053 Mfap1aC0HKD8 439 aaKnown RBP7.69□□□□□ -1.18
Shprh-201ENSMUST00000044053 Mfap1bC0HKD9 439 aaKnown RBP7.69□□□□□ -1.18
Shprh-201ENSMUST00000044053 Paxip1Q6NZQ4 1056 aa7.69□□□□□ -1.18
Shprh-201ENSMUST00000044053 Pkd2O35245 966 aa7.69□□□□□ -1.18
Shprh-201ENSMUST00000044053 Mre11Q61216 706 aa7.69□□□□□ -1.18
Shprh-201ENSMUST00000044053 CrbnQ8C7D2 445 aa7.69□□□□□ -1.18
Shprh-201ENSMUST00000044053 Znf710Q3U288 666 aa7.69□□□□□ -1.18
Shprh-201ENSMUST00000044053 IqubQ8CDK3 788 aa7.69□□□□□ -1.18
Shprh-201ENSMUST00000044053 Hmgb1P63158 215 aaKnown RBP7.69□□□□□ -1.18
Shprh-201ENSMUST00000044053 Gtf2a1Q99PM3 378 aa7.69□□□□□ -1.18
Shprh-201ENSMUST00000044053 Iqcf3Q9D498 203 aa7.69□□□□□ -1.18
Shprh-201ENSMUST00000044053 Speer4f1Q9D5Q6 258 aa7.69□□□□□ -1.18
Shprh-201ENSMUST00000044053 Ush1cQ9ES64 910 aa7.68□□□□□ -1.18
Shprh-201ENSMUST00000044053 Setd1bQ8CFT2 1985 aa7.68□□□□□ -1.18
Shprh-201ENSMUST00000044053 Eif2s2Q99L45 331 aaKnown RBP7.68□□□□□ -1.18
Shprh-201ENSMUST00000044053 Mapk8ip3Q9ESN9 1337 aa7.68□□□□□ -1.18
Shprh-201ENSMUST00000044053 Tmco5bQ80X59 307 aa7.68□□□□□ -1.18
Shprh-201ENSMUST00000044053 Q8BT18 775 aa7.68□□□□□ -1.18
Shprh-201ENSMUST00000044053 Ifit1bl1D3Z6F0 470 aa7.68□□□□□ -1.18
Shprh-201ENSMUST00000044053 Cep162Q6ZQ06 1403 aa7.68□□□□□ -1.18
Shprh-201ENSMUST00000044053 PnnO35691 725 aaKnown RBP7.67□□□□□ -1.18
Shprh-201ENSMUST00000044053 U2surpQ6NV83 1029 aaKnown RBP7.67□□□□□ -1.18
Shprh-201ENSMUST00000044053 Zfp777B9EKF4 885 aa7.67□□□□□ -1.18
Shprh-201ENSMUST00000044053 GorabQ8BRM2 368 aa7.67□□□□□ -1.18
Shprh-201ENSMUST00000044053 Trak1Q6PD31 939 aa7.67□□□□□ -1.18
Shprh-201ENSMUST00000044053 Mak16Q8BGS0 296 aaKnown RBP7.67□□□□□ -1.18
Shprh-201ENSMUST00000044053 Kcnh8P59111 1102 aa7.67□□□□□ -1.18
Shprh-201ENSMUST00000044053 AampJ3QN89 436 aa7.67□□□□□ -1.18
Shprh-201ENSMUST00000044053 Znf771Q8BJ90 317 aa7.67□□□□□ -1.18
Shprh-201ENSMUST00000044053 Trim30aP15533 496 aa7.66□□□□□ -1.18
Shprh-201ENSMUST00000044053 Stk26Q99JT2 416 aa7.66□□□□□ -1.18
Shprh-201ENSMUST00000044053 Mia2Q91ZV0 1396 aa7.66□□□□□ -1.18
Shprh-201ENSMUST00000044053 Rapgef2Q8CHG7 1496 aa7.66□□□□□ -1.18
Shprh-201ENSMUST00000044053 Pds5bQ4VA53 1446 aaKnown RBP7.66□□□□□ -1.18
Shprh-201ENSMUST00000044053 Synj1Q8CHC4 1574 aa7.66□□□□□ -1.18
Shprh-201ENSMUST00000044053 Map7d2A2AG50 781 aa7.65□□□□□ -1.18
Shprh-201ENSMUST00000044053 Tomm22Q9CPQ3 142 aa7.65□□□□□ -1.18
Shprh-201ENSMUST00000044053 Map7O88735 730 aa7.65□□□□□ -1.19
Shprh-201ENSMUST00000044053 Smg6P61406 1418 aaKnown RBP7.64□□□□□ -1.19
Shprh-201ENSMUST00000044053 Ak9G3UYQ4 1894 aa7.64□□□□□ -1.19
Shprh-201ENSMUST00000044053 Plcd3Q8K2J0 785 aa7.64□□□□□ -1.19
Shprh-201ENSMUST00000044053 Mphosph9A6H5Y1 991 aa7.64□□□□□ -1.19
Shprh-201ENSMUST00000044053 Cabp1Q9JLK7 227 aa7.64□□□□□ -1.19
Shprh-201ENSMUST00000044053 Dusp9Q7TNL7 452 aa7.64□□□□□ -1.19
Shprh-201ENSMUST00000044053 Zscan21Q07231 555 aa7.63□□□□□ -1.19
Shprh-201ENSMUST00000044053 Pibf1E9Q6K3 756 aa7.62□□□□□ -1.19
Shprh-201ENSMUST00000044053 Atad2bE9Q166 1460 aaKnown RBP7.62□□□□□ -1.19
Shprh-201ENSMUST00000044053 Rfx1P48377 963 aa7.61□□□□□ -1.19
Shprh-201ENSMUST00000044053 Tmf1B9EKI3 1091 aa7.61□□□□□ -1.19
Shprh-201ENSMUST00000044053 Pnmal2G3X9N3 661 aa7.61□□□□□ -1.19
Shprh-201ENSMUST00000044053 Dcaf11Q91VU6 549 aa7.61□□□□□ -1.19
Shprh-201ENSMUST00000044053 Cttnbp2B9EJA2 1648 aa7.61□□□□□ -1.19
Shprh-201ENSMUST00000044053 Fhad1A6PWD2 1420 aa7.61□□□□□ -1.19
Shprh-201ENSMUST00000044053 Aebp1Q640N1 1128 aa7.6□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms