RNA–Protein interactions for RNA: ENSMUST00000044053.12

Shprh-201, Transcript of E3 ubiquitin-protein ligase SHPRH, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Shprh, Length 9,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shprh-201ENSMUST00000044053 Rhox8Q6VSS7 320 aa10.63□□□□□ -0.71
Shprh-201ENSMUST00000044053 Ehmt2Q9Z148 1263 aaKnown RBP10.14□□□□□ -0.79
Shprh-201ENSMUST00000044053 Rpgrip1Q9EPQ2 1331 aa10.11□□□□□ -0.79
Shprh-201ENSMUST00000044053 Las1lA2BE28 776 aaKnown RBP9.91□□□□□ -0.82
Shprh-201ENSMUST00000044053 Pelp1Q9DBD5 1123 aaKnown RBP9.9□□□□□ -0.82
Shprh-201ENSMUST00000044053 Cngb1E1AZ71 1325 aa9.83□□□□□ -0.84
Shprh-201ENSMUST00000044053 Zeb1Q64318 1117 aa9.67□□□□□ -0.86
Shprh-201ENSMUST00000044053 Wdr66E9Q743 1299 aa9.64□□□□□ -0.87
Shprh-201ENSMUST00000044053 4930567H17RikQ3V0K5 233 aa9.61□□□□□ -0.87
Shprh-201ENSMUST00000044053 Ccdc136Q3TVA9 1136 aa9.6□□□□□ -0.87
Shprh-201ENSMUST00000044053 Amer1Q7TS75 1132 aa9.53□□□□□ -0.88
Shprh-201ENSMUST00000044053 Pcgf6Q99NA9 353 aa9.48□□□□□ -0.89
Shprh-201ENSMUST00000044053 Acin1Q9JIX8 1338 aaKnown RBP9.46□□□□□ -0.9
Shprh-201ENSMUST00000044053 CenpbP27790 599 aa9.46□□□□□ -0.9
Shprh-201ENSMUST00000044053 Ttbk1Q6PCN3 1308 aa9.44□□□□□ -0.9
Shprh-201ENSMUST00000044053 Gab3Q8BSM5 595 aa9.39□□□□□ -0.91
Shprh-201ENSMUST00000044053 DiexfQ8BTT6 772 aaKnown RBP9.37□□□□□ -0.91
Shprh-201ENSMUST00000044053 NischQ80TM9 1593 aa9.31□□□□□ -0.92
Shprh-201ENSMUST00000044053 Esf1Q3V1V3 845 aaKnown RBP9.3□□□□□ -0.92
Shprh-201ENSMUST00000044053 Ube2uB1AUC4 352 aa9.25□□□□□ -0.93
Shprh-201ENSMUST00000044053 Supt5hO55201 1082 aaKnown RBP9.25□□□□□ -0.93
Shprh-201ENSMUST00000044053 Rtl1Q7M732 1744 aa9.25□□□□□ -0.93
Shprh-201ENSMUST00000044053 Myt1Q8CFC2 1127 aa9.24□□□□□ -0.93
Shprh-201ENSMUST00000044053 Myt1lP97500 1187 aa9.21□□□□□ -0.94
Shprh-201ENSMUST00000044053 Trim41Q5NCC3 630 aa9.18□□□□□ -0.94
Shprh-201ENSMUST00000044053 Ccdc180J3QNE4 1664 aa9.17□□□□□ -0.94
Shprh-201ENSMUST00000044053 Ppargc1bQ8VHJ7 1014 aa9.13□□□□□ -0.95
Shprh-201ENSMUST00000044053 Gm38655A0A286YDK6 273 aa9.12□□□□□ -0.95
Shprh-201ENSMUST00000044053 UbtfP25976 765 aaKnown RBP9.11□□□□□ -0.95
Shprh-201ENSMUST00000044053 Npm2Q80W85 207 aa9.11□□□□□ -0.95
Shprh-201ENSMUST00000044053 Neurod1Q60867 357 aa9.11□□□□□ -0.95
Shprh-201ENSMUST00000044053 Slc24a1Q91WD8 1130 aa9.09□□□□□ -0.95
Shprh-201ENSMUST00000044053 Cdk11bP24788 784 aaKnown RBP9.07□□□□□ -0.96
Shprh-201ENSMUST00000044053 Csrnp3P59055 597 aa9.06□□□□□ -0.96
Shprh-201ENSMUST00000044053 Gm35339A0A140LHH9 1649 aa9.04□□□□□ -0.96
Shprh-201ENSMUST00000044053 4933416C03RikQ3V063 378 aa9.01□□□□□ -0.97
Shprh-201ENSMUST00000044053 Nop58Q6DFW4 536 aaKnown RBP8.98□□□□□ -0.97
Shprh-201ENSMUST00000044053 Abcc9P70170 1546 aa8.98□□□□□ -0.97
Shprh-201ENSMUST00000044053 NefmP08553 848 aa8.94□□□□□ -0.98
Shprh-201ENSMUST00000044053 Bcl11aQ9QYE3 773 aa8.84□□□□□ -0.99
Shprh-201ENSMUST00000044053 HrcG5E8J6 738 aa8.84□□□□□ -0.99
Shprh-201ENSMUST00000044053 Eif5bQ05D44 1216 aaKnown RBP8.84□□□□□ -0.99
Shprh-201ENSMUST00000044053 1700123L14RikQ3V2K7 440 aa8.82□□□□□ -1
Shprh-201ENSMUST00000044053 Stra8P70278 393 aa8.81□□□□□ -1
Shprh-201ENSMUST00000044053 Ap3b1Q9Z1T1 1105 aa8.81□□□□□ -1
Shprh-201ENSMUST00000044053 Ythdc1E9Q5K9 736 aaKnown RBP8.8□□□□□ -1
Shprh-201ENSMUST00000044053 Il27Q8K3I6 234 aa8.78□□□□□ -1
Shprh-201ENSMUST00000044053 Tnnt3Q9QZ47 272 aa8.78□□□□□ -1
Shprh-201ENSMUST00000044053 Anks4bQ8K3X6 423 aa8.75□□□□□ -1.01
Shprh-201ENSMUST00000044053 Mapk8ip2Q9ERE9 830 aa8.75□□□□□ -1.01
Shprh-201ENSMUST00000044053 Fam50aQ9WV03 339 aaKnown RBP8.75□□□□□ -1.01
Shprh-201ENSMUST00000044053 Abcc8B2RUS7 1588 aa8.74□□□□□ -1.01
Shprh-201ENSMUST00000044053 Rtl5Q5DTT4 599 aa8.72□□□□□ -1.01
Shprh-201ENSMUST00000044053 NclP09405 707 aaKnown RBP8.72□□□□□ -1.01
Shprh-201ENSMUST00000044053 Aplp2Q06335 707 aa8.71□□□□□ -1.02
Shprh-201ENSMUST00000044053 DaxxO35613 739 aa8.7□□□□□ -1.02
Shprh-201ENSMUST00000044053 Fam71e1A1L3C1 212 aa8.7□□□□□ -1.02
Shprh-201ENSMUST00000044053 Sall2Q9QX96 1004 aa8.69□□□□□ -1.02
Shprh-201ENSMUST00000044053 Anp32aO35381 247 aa8.68□□□□□ -1.02
Shprh-201ENSMUST00000044053 Mier1Q5UAK0 511 aa8.68□□□□□ -1.02
Shprh-201ENSMUST00000044053 Zcchc6Q5BLK4 1491 aaKnown RBP8.66□□□□□ -1.02
Shprh-201ENSMUST00000044053 TonslQ6NZL6 1363 aa8.61□□□□□ -1.03
Shprh-201ENSMUST00000044053 NrdcQ8BHG1 1161 aa8.6□□□□□ -1.03
Shprh-201ENSMUST00000044053 ClspnQ80YR7 1315 aa8.58□□□□□ -1.04
Shprh-201ENSMUST00000044053 Plekhg3Q4VAC9 1341 aa8.56□□□□□ -1.04
Shprh-201ENSMUST00000044053 NeflP08551 543 aa8.54□□□□□ -1.04
Shprh-201ENSMUST00000044053 Zbtb7cQ8VCZ7 619 aa8.54□□□□□ -1.04
Shprh-201ENSMUST00000044053 PrkcshO08795 521 aa8.53□□□□□ -1.04
Shprh-201ENSMUST00000044053 Eid3Q3V124 375 aa8.52□□□□□ -1.05
Shprh-201ENSMUST00000044053 Dcaf1Q80TR8 1506 aa8.51□□□□□ -1.05
Shprh-201ENSMUST00000044053 ArxO35085 564 aa8.51□□□□□ -1.05
Shprh-201ENSMUST00000044053 Zbtb4Q5F293 982 aa8.51□□□□□ -1.05
Shprh-201ENSMUST00000044053 Ppp4r2Q0VGB7 417 aa8.5□□□□□ -1.05
Shprh-201ENSMUST00000044053 Os9Q8K2C7 672 aa8.48□□□□□ -1.05
Shprh-201ENSMUST00000044053 Lmod2Q3UHZ5 550 aa8.48□□□□□ -1.05
Shprh-201ENSMUST00000044053 SafbD3YXK2 937 aaKnown RBP8.46□□□□□ -1.06
Shprh-201ENSMUST00000044053 Hsp90aa1P07901 733 aaKnown RBP8.44□□□□□ -1.06
Shprh-201ENSMUST00000044053 Calr4Q3TQS0 420 aa8.44□□□□□ -1.06
Shprh-201ENSMUST00000044053 Lmod3E9QA62 571 aa8.44□□□□□ -1.06
Shprh-201ENSMUST00000044053 Chic1Q8CBW7 227 aa8.42□□□□□ -1.06
Shprh-201ENSMUST00000044053 Anp32bQ9EST5 272 aaKnown RBP8.41□□□□□ -1.06
Shprh-201ENSMUST00000044053 Prdm10Q3UTQ7 1184 aa8.41□□□□□ -1.06
Shprh-201ENSMUST00000044053 Hnrnpul2Q00PI9 745 aaKnown RBP8.39□□□□□ -1.07
Shprh-201ENSMUST00000044053 Taok2Q6ZQ29 1240 aa8.39□□□□□ -1.07
Shprh-201ENSMUST00000044053 Aebp2Q9Z248 504 aaKnown RBP8.37□□□□□ -1.07
Shprh-201ENSMUST00000044053 Ifnlr1Q8CGK5 535 aa8.36□□□□□ -1.07
Shprh-201ENSMUST00000044053 Wdr43Q6ZQL4 677 aaKnown RBP8.32□□□□□ -1.08
Shprh-201ENSMUST00000044053 Rb1cc1Q9ESK9 1588 aa8.32□□□□□ -1.08
Shprh-201ENSMUST00000044053 Rangap1P46061 589 aaKnown RBP8.32□□□□□ -1.08
Shprh-201ENSMUST00000044053 Polr3glQ8R0C0 218 aa8.31□□□□□ -1.08
Shprh-201ENSMUST00000044053 Pknox2Q8BG99 474 aa8.31□□□□□ -1.08
Shprh-201ENSMUST00000044053 Hdac5Q9Z2V6 1113 aa8.29□□□□□ -1.08
Shprh-201ENSMUST00000044053 CatipB9EKE5 520 aa8.28□□□□□ -1.08
Shprh-201ENSMUST00000044053 Irx3P81067 507 aa8.28□□□□□ -1.08
Shprh-201ENSMUST00000044053 Ccdc27Q3V036 639 aa8.28□□□□□ -1.08
Shprh-201ENSMUST00000044053 Erich6D3Z6S9 713 aa8.27□□□□□ -1.09
Shprh-201ENSMUST00000044053 Vsig10D3YX43 558 aa8.26□□□□□ -1.09
Shprh-201ENSMUST00000044053 P3h3Q8CG70 732 aa8.26□□□□□ -1.09
Shprh-201ENSMUST00000044053 Ccdc9Q8VC31 543 aaKnown RBP8.24□□□□□ -1.09
Shprh-201ENSMUST00000044053 Rtn4Q99P72 1162 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms