Protein–RNA interactions for Protein: Q8CHC4

Synj1, Synaptojanin-1, mousemouse

Predictions only

Length 1,574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Synj1Q8CHC4 Gm25239-201ENSMUST00000174915 86 ntBASIC69.64■■■■■ 8.74
Synj1Q8CHC4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC64.75■■■■■ 7.96
Synj1Q8CHC4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC63.37■■■■■ 7.73
Synj1Q8CHC4 Gm24109-201ENSMUST00000175489 103 ntBASIC60.81■■■■■ 7.33
Synj1Q8CHC4 Gm15042-201ENSMUST00000120212 883 ntBASIC60.39■■■■■ 7.26
Synj1Q8CHC4 Gm15045-201ENSMUST00000117359 883 ntBASIC59.22■■■■■ 7.07
Synj1Q8CHC4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC58.84■■■■■ 7.01
Synj1Q8CHC4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC58.54■■■■■ 6.96
Synj1Q8CHC4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC58.26■■■■■ 6.92
Synj1Q8CHC4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC58.21■■■■■ 6.91
Synj1Q8CHC4 Gm23366-201ENSMUST00000175022 89 ntBASIC57.95■■■■■ 6.87
Synj1Q8CHC4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC56.96■■■■■ 6.71
Synj1Q8CHC4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC56.68■■■■■ 6.66
Synj1Q8CHC4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC56.27■■■■■ 6.6
Synj1Q8CHC4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC56.21■■■■■ 6.59
Synj1Q8CHC4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC56.15■■■■■ 6.58
Synj1Q8CHC4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC56■■■■■ 6.56
Synj1Q8CHC4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC56■■■■■ 6.56
Synj1Q8CHC4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC55.55■■■■■ 6.48
Synj1Q8CHC4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC55.4■■■■■ 6.46
Synj1Q8CHC4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC55.38■■■■■ 6.46
Synj1Q8CHC4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC55.19■■■■■ 6.43
Synj1Q8CHC4 Gm25238-201ENSMUST00000174914 89 ntBASIC55.14■■■■■ 6.42
Synj1Q8CHC4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC55.03■■■■■ 6.4
Synj1Q8CHC4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC54.98■■■■■ 6.39
Synj1Q8CHC4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC54.97■■■■■ 6.39
Synj1Q8CHC4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC54.62■■■■■ 6.33
Synj1Q8CHC4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC54.6■■■■■ 6.33
Synj1Q8CHC4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC54.42■■■■■ 6.3
Synj1Q8CHC4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC54.22■■■■■ 6.27
Synj1Q8CHC4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC54.13■■■■■ 6.26
Synj1Q8CHC4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC54.13■■■■■ 6.26
Synj1Q8CHC4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC54.04■■■■■ 6.24
Synj1Q8CHC4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC53.79■■■■■ 6.2
Synj1Q8CHC4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC53.75■■■■■ 6.2
Synj1Q8CHC4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC53.41■■■■■ 6.14
Synj1Q8CHC4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC53.4■■■■■ 6.14
Synj1Q8CHC4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC53.21■■■■■ 6.11
Synj1Q8CHC4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC53.16■■■■■ 6.1
Synj1Q8CHC4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC52.98■■■■■ 6.07
Synj1Q8CHC4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC52.82■■■■■ 6.05
Synj1Q8CHC4 Gm25262-201ENSMUST00000174934 133 ntBASIC52.8■■■■■ 6.04
Synj1Q8CHC4 Gm27325-201ENSMUST00000175467 74 ntBASIC52.79■■■■■ 6.04
Synj1Q8CHC4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC52.79■■■■■ 6.04
Synj1Q8CHC4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC52.63■■■■■ 6.02
Synj1Q8CHC4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC52.44■■■■■ 5.99
Synj1Q8CHC4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC52.41■■■■■ 5.98
Synj1Q8CHC4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC52.4■■■■■ 5.98
Synj1Q8CHC4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC52.19■■■■■ 5.95
Synj1Q8CHC4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC52.13■■■■■ 5.94
Synj1Q8CHC4 Rab21-202ENSMUST00000218831 843 ntBASIC52.13■■■■■ 5.93
Synj1Q8CHC4 Psd-208ENSMUST00000224556 2034 ntBASIC52.07■■■■■ 5.93
Synj1Q8CHC4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC52.05■■■■■ 5.92
Synj1Q8CHC4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC51.96■■■■■ 5.91
Synj1Q8CHC4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC51.74■■■■■ 5.87
Synj1Q8CHC4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC51.72■■■■■ 5.87
Synj1Q8CHC4 Gm26115-201ENSMUST00000175605 87 ntBASIC51.7■■■■■ 5.87
Synj1Q8CHC4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC51.68■■■■■ 5.86
Synj1Q8CHC4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC51.67■■■■■ 5.86
Synj1Q8CHC4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC51.66■■■■■ 5.86
Synj1Q8CHC4 Gm8109-201ENSMUST00000194076 746 ntBASIC51.59■■■■■ 5.85
Synj1Q8CHC4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC51.59■■■■■ 5.85
Synj1Q8CHC4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC51.41■■■■■ 5.82
Synj1Q8CHC4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC51.4■■■■■ 5.82
Synj1Q8CHC4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC51.4■■■■■ 5.82
Synj1Q8CHC4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC51.36■■■■■ 5.81
Synj1Q8CHC4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC51.36■■■■■ 5.81
Synj1Q8CHC4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC51.18■■■■■ 5.78
Synj1Q8CHC4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC51.16■■■■■ 5.78
Synj1Q8CHC4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC51.11■■■■■ 5.77
Synj1Q8CHC4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC51.08■■■■■ 5.77
Synj1Q8CHC4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC51.07■■■■■ 5.77
Synj1Q8CHC4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC50.98■■■■■ 5.75
Synj1Q8CHC4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC50.9■■■■■ 5.74
Synj1Q8CHC4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC50.82■■■■■ 5.73
Synj1Q8CHC4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC50.8■■■■■ 5.72
Synj1Q8CHC4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC50.78■■■■■ 5.72
Synj1Q8CHC4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC50.75■■■■■ 5.71
Synj1Q8CHC4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC50.69■■■■■ 5.7
Synj1Q8CHC4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC50.6■■■■■ 5.69
Synj1Q8CHC4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC50.56■■■■■ 5.68
Synj1Q8CHC4 Gm17082-201ENSMUST00000166043 1091 ntBASIC50.56■■■■■ 5.68
Synj1Q8CHC4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC50.48■■■■■ 5.67
Synj1Q8CHC4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC50.47■■■■■ 5.67
Synj1Q8CHC4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC50.41■■■■■ 5.66
Synj1Q8CHC4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC50.3■■■■■ 5.64
Synj1Q8CHC4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC50.28■■■■■ 5.64
Synj1Q8CHC4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC50.28■■■■■ 5.64
Synj1Q8CHC4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC50.27■■■■■ 5.64
Synj1Q8CHC4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC50.24■■■■■ 5.63
Synj1Q8CHC4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC50.11■■■■■ 5.61
Synj1Q8CHC4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC50.09■■■■■ 5.61
Synj1Q8CHC4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC50.05■■■■■ 5.6
Synj1Q8CHC4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC50.01■■■■■ 5.6
Synj1Q8CHC4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC49.95■■■■■ 5.59
Synj1Q8CHC4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC49.9■■■■■ 5.58
Synj1Q8CHC4 Gm24804-201ENSMUST00000174982 85 ntBASIC49.87■■■■■ 5.57
Synj1Q8CHC4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC49.87■■■■■ 5.57
Synj1Q8CHC4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC49.78■■■■■ 5.56
Synj1Q8CHC4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC49.78■■■■■ 5.56
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms