RNA–Protein interactions for RNA: ENSMUST00000021761.12

Trim27-201, Transcript of Zinc finger protein RFP, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim27, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-201ENSMUST00000021761 Pak3Q61036 559 aa18.18■□□□□ 0.5
Trim27-201ENSMUST00000021761 CrbnQ8C7D2 445 aa18.17■□□□□ 0.5
Trim27-201ENSMUST00000021761 Srpk2O54781 681 aaKnown RBP18.17■□□□□ 0.5
Trim27-201ENSMUST00000021761 Speer4f1Q9D5Q6 258 aa18.17■□□□□ 0.5
Trim27-201ENSMUST00000021761 Naip1Q9QWK5 1403 aa18.17■□□□□ 0.5
Trim27-201ENSMUST00000021761 Rwdd1Q9CQK7 243 aa18.16■□□□□ 0.5
Trim27-201ENSMUST00000021761 Ipo9Q91YE6 1041 aa18.15■□□□□ 0.5
Trim27-201ENSMUST00000021761 Slc4a2P13808 1237 aaKnown RBP18.15■□□□□ 0.5
Trim27-201ENSMUST00000021761 LrpprcQ6PB66 1392 aaKnown RBP18.12■□□□□ 0.49
Trim27-201ENSMUST00000021761 Irx3P81067 507 aa18.11■□□□□ 0.49
Trim27-201ENSMUST00000021761 Ppm1gQ61074 542 aa18.11■□□□□ 0.49
Trim27-201ENSMUST00000021761 Iqgap2Q3UQ44 1575 aa18.08■□□□□ 0.49
Trim27-201ENSMUST00000021761 PrkcshO08795 521 aa18.08■□□□□ 0.48
Trim27-201ENSMUST00000021761 Kcnh8P59111 1102 aa18.07■□□□□ 0.48
Trim27-201ENSMUST00000021761 Dnai1Q8C0M8 701 aa18.05■□□□□ 0.48
Trim27-201ENSMUST00000021761 Gm6268A2A3U9 297 aa18.05■□□□□ 0.48
Trim27-201ENSMUST00000021761 Slc4a1apE9PX68 744 aa18.05■□□□□ 0.48
Trim27-201ENSMUST00000021761 Fhad1A6PWD2 1420 aa18.05■□□□□ 0.48
Trim27-201ENSMUST00000021761 Plcb2A3KGF7 1181 aa18.05■□□□□ 0.48
Trim27-201ENSMUST00000021761 Exosc9Q9JHI7 438 aaKnown RBP18.04■□□□□ 0.48
Trim27-201ENSMUST00000021761 Pank3Q8R2W9 370 aa18.04■□□□□ 0.48
Trim27-201ENSMUST00000021761 Nup155Q99P88 1391 aaKnown RBP18.04■□□□□ 0.48
Trim27-201ENSMUST00000021761 Inpp5dQ9ES52 1191 aa18.04■□□□□ 0.48
Trim27-201ENSMUST00000021761 Dcaf11Q91VU6 549 aa18.03■□□□□ 0.48
Trim27-201ENSMUST00000021761 Ythdc1E9Q5K9 736 aaKnown RBP18.03■□□□□ 0.48
Trim27-201ENSMUST00000021761 Shroom4Q1W617 1475 aa18.03■□□□□ 0.48
Trim27-201ENSMUST00000021761 Esx1O88933 382 aa18.03■□□□□ 0.48
Trim27-201ENSMUST00000021761 Senp3Q9EP97 568 aaKnown RBP18.02■□□□□ 0.48
Trim27-201ENSMUST00000021761 Plekhh2Q8C115 1491 aa18.02■□□□□ 0.47
Trim27-201ENSMUST00000021761 Stag3O70576 1240 aa18.01■□□□□ 0.47
Trim27-201ENSMUST00000021761 EspnQ9ET47 871 aa18.01■□□□□ 0.47
Trim27-201ENSMUST00000021761 Tmf1B9EKI3 1091 aa18.01■□□□□ 0.47
Trim27-201ENSMUST00000021761 Rpgrip1lQ8CG73 1264 aa18.01■□□□□ 0.47
Trim27-201ENSMUST00000021761 UacaQ8CGB3 1411 aa18.01■□□□□ 0.47
Trim27-201ENSMUST00000021761 Cluap1Q8R3P7 413 aa18.01■□□□□ 0.47
Trim27-201ENSMUST00000021761 Dhx29Q6PGC1 1365 aaKnown RBP17.99■□□□□ 0.47
Trim27-201ENSMUST00000021761 Irx6Q9ER75 438 aa17.99■□□□□ 0.47
Trim27-201ENSMUST00000021761 Dapk1Q80YE7 1442 aa17.99■□□□□ 0.47
Trim27-201ENSMUST00000021761 Arhgef5E9Q7D5 1581 aa17.98■□□□□ 0.47
Trim27-201ENSMUST00000021761 Srcin1Q9QWI6 1250 aa17.98■□□□□ 0.47
Trim27-201ENSMUST00000021761 Phldb1Q6PDH0 1371 aaKnown RBP17.98■□□□□ 0.47
Trim27-201ENSMUST00000021761 Ankrd36D3Z4K0 1415 aa17.98■□□□□ 0.47
Trim27-201ENSMUST00000021761 Htatsf1Q8BGC0 757 aa17.97■□□□□ 0.47
Trim27-201ENSMUST00000021761 Fgd1P52734 960 aa17.97■□□□□ 0.47
Trim27-201ENSMUST00000021761 IqubQ8CDK3 788 aa17.97■□□□□ 0.47
Trim27-201ENSMUST00000021761 WrnO09053 1401 aa17.96■□□□□ 0.46
Trim27-201ENSMUST00000021761 Arid3cA6PWV5 409 aa17.95■□□□□ 0.46
Trim27-201ENSMUST00000021761 1700019A02RikA0A087WPV9 146 aa17.95■□□□□ 0.46
Trim27-201ENSMUST00000021761 Q7TT23 1179 aa17.95■□□□□ 0.46
Trim27-201ENSMUST00000021761 Rock2P70336 1388 aa17.95■□□□□ 0.46
Trim27-201ENSMUST00000021761 Top2bQ64511 1612 aa17.95■□□□□ 0.46
Trim27-201ENSMUST00000021761 Znf330Q922H9 316 aa17.94■□□□□ 0.46
Trim27-201ENSMUST00000021761 Golga2Q921M4 999 aa17.94■□□□□ 0.46
Trim27-201ENSMUST00000021761 Gtf2e1Q9D0D5 440 aa17.94■□□□□ 0.46
Trim27-201ENSMUST00000021761 Trim44Q9QXA7 346 aa17.94■□□□□ 0.46
Trim27-201ENSMUST00000021761 Rad54l2Q99NG0 1466 aa17.94■□□□□ 0.46
Trim27-201ENSMUST00000021761 Sart1Q9Z315 806 aaKnown RBP17.93■□□□□ 0.46
Trim27-201ENSMUST00000021761 Mapk8ip3Q9ESN9 1337 aa17.93■□□□□ 0.46
Trim27-201ENSMUST00000021761 Vps8Q0P5W1 1427 aa17.93■□□□□ 0.46
Trim27-201ENSMUST00000021761 AknaQ80VW7 1404 aa17.93■□□□□ 0.46
Trim27-201ENSMUST00000021761 Mbd3Q9Z2D8 285 aaKnown RBP17.92■□□□□ 0.46
Trim27-201ENSMUST00000021761 Plin1Q8CGN5 517 aa17.92■□□□□ 0.46
Trim27-201ENSMUST00000021761 PnisrA2AJT4 805 aaKnown RBP17.91■□□□□ 0.46
Trim27-201ENSMUST00000021761 Stk26Q99JT2 416 aa17.91■□□□□ 0.46
Trim27-201ENSMUST00000021761 Tdrd9Q14BI7 1383 aa17.91■□□□□ 0.46
Trim27-201ENSMUST00000021761 AqrQ8CFQ3 1481 aaKnown RBP17.91■□□□□ 0.46
Trim27-201ENSMUST00000021761 U2af1Q9D883 239 aaKnown RBP17.91■□□□□ 0.46
Trim27-201ENSMUST00000021761 Washc2Q6PGL7 1334 aa17.89■□□□□ 0.46
Trim27-201ENSMUST00000021761 BicraF8VPZ9 1578 aa17.89■□□□□ 0.45
Trim27-201ENSMUST00000021761 Sart3Q9JLI8 962 aaKnown RBP17.89■□□□□ 0.45
Trim27-201ENSMUST00000021761 Fan1Q69ZT1 1020 aa17.88■□□□□ 0.45
Trim27-201ENSMUST00000021761 Tmco5bQ80X59 307 aa17.87■□□□□ 0.45
Trim27-201ENSMUST00000021761 Lmod3E9QA62 571 aa17.86■□□□□ 0.45
Trim27-201ENSMUST00000021761 Ipo8Q7TMY7 1010 aa17.86■□□□□ 0.45
Trim27-201ENSMUST00000021761 Dnttip2Q8R2M2 758 aaKnown RBP17.86■□□□□ 0.45
Trim27-201ENSMUST00000021761 Kif3bQ61771 747 aa17.85■□□□□ 0.45
Trim27-201ENSMUST00000021761 Tiam1Q60610 1591 aa17.85■□□□□ 0.45
Trim27-201ENSMUST00000021761 Efcab5A0JP43 1406 aa17.84■□□□□ 0.45
Trim27-201ENSMUST00000021761 Ksr2Q3UVC0 959 aa17.84■□□□□ 0.45
Trim27-201ENSMUST00000021761 Mroh2bQ7M6Y6 1581 aa17.84■□□□□ 0.45
Trim27-201ENSMUST00000021761 Gtf3c3Q3TMP1 882 aa17.83■□□□□ 0.45
Trim27-201ENSMUST00000021761 NrkQ9R0G8 1455 aa17.83■□□□□ 0.44
Trim27-201ENSMUST00000021761 Mfap1aC0HKD8 439 aaKnown RBP17.83■□□□□ 0.44
Trim27-201ENSMUST00000021761 Mfap1bC0HKD9 439 aaKnown RBP17.83■□□□□ 0.44
Trim27-201ENSMUST00000021761 Zfp444Q3TDV8 331 aaKnown RBP17.83■□□□□ 0.44
Trim27-201ENSMUST00000021761 Dhx9O70133 1380 aaKnown RBP17.82■□□□□ 0.44
Trim27-201ENSMUST00000021761 NgefQ8CHT1 710 aa17.82■□□□□ 0.44
Trim27-201ENSMUST00000021761 Zscan10Q3URR7 782 aa17.81■□□□□ 0.44
Trim27-201ENSMUST00000021761 Eif2s2Q99L45 331 aaKnown RBP17.81■□□□□ 0.44
Trim27-201ENSMUST00000021761 Ttll13A4Q9F6 804 aa17.81■□□□□ 0.44
Trim27-201ENSMUST00000021761 L3mbtl2P59178 703 aa17.8■□□□□ 0.44
Trim27-201ENSMUST00000021761 Rock1P70335 1354 aa17.8■□□□□ 0.44
Trim27-201ENSMUST00000021761 PtmaP26350 111 aa17.8■□□□□ 0.44
Trim27-201ENSMUST00000021761 Grin2bQ01097 1482 aa17.77■□□□□ 0.44
Trim27-201ENSMUST00000021761 Cc2d2bA0A286YDU8 1405 aa17.77■□□□□ 0.44
Trim27-201ENSMUST00000021761 U2surpQ6NV83 1029 aaKnown RBP17.77■□□□□ 0.44
Trim27-201ENSMUST00000021761 Duox2A2AQ99 1517 aa17.77■□□□□ 0.44
Trim27-201ENSMUST00000021761 Ttll5Q8CHB8 1328 aa17.77■□□□□ 0.44
Trim27-201ENSMUST00000021761 GorabQ8BRM2 368 aa17.77■□□□□ 0.43
Trim27-201ENSMUST00000021761 Map7O88735 730 aa17.77■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms