RNA–Protein interactions for RNA: ENSMUST00000021761.12

Trim27-201, Transcript of Zinc finger protein RFP, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim27, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-201ENSMUST00000021761 Rhox8Q6VSS7 320 aa25.02■■□□□ 1.6
Trim27-201ENSMUST00000021761 Ehmt2Q9Z148 1263 aaKnown RBP23.28■■□□□ 1.32
Trim27-201ENSMUST00000021761 NischQ80TM9 1593 aa23■■□□□ 1.27
Trim27-201ENSMUST00000021761 Rpgrip1Q9EPQ2 1331 aa22.83■■□□□ 1.25
Trim27-201ENSMUST00000021761 Ccdc136Q3TVA9 1136 aa22.71■■□□□ 1.23
Trim27-201ENSMUST00000021761 Gab3Q8BSM5 595 aa22.05■■□□□ 1.12
Trim27-201ENSMUST00000021761 Trim41Q5NCC3 630 aa22.04■■□□□ 1.12
Trim27-201ENSMUST00000021761 Acin1Q9JIX8 1338 aaKnown RBP21.98■■□□□ 1.11
Trim27-201ENSMUST00000021761 Zeb1Q64318 1117 aa21.98■■□□□ 1.11
Trim27-201ENSMUST00000021761 Cngb1E1AZ71 1325 aa21.96■■□□□ 1.11
Trim27-201ENSMUST00000021761 Wdr66E9Q743 1299 aa21.69■■□□□ 1.06
Trim27-201ENSMUST00000021761 Esf1Q3V1V3 845 aaKnown RBP21.69■■□□□ 1.06
Trim27-201ENSMUST00000021761 Abcc9P70170 1546 aa21.66■■□□□ 1.06
Trim27-201ENSMUST00000021761 Ccdc180J3QNE4 1664 aa21.57■■□□□ 1.04
Trim27-201ENSMUST00000021761 Pcgf6Q99NA9 353 aa21.55■■□□□ 1.04
Trim27-201ENSMUST00000021761 HrcG5E8J6 738 aa21.47■■□□□ 1.03
Trim27-201ENSMUST00000021761 Las1lA2BE28 776 aaKnown RBP21.42■■□□□ 1.02
Trim27-201ENSMUST00000021761 Myt1lP97500 1187 aa21.37■■□□□ 1.01
Trim27-201ENSMUST00000021761 UbtfP25976 765 aaKnown RBP21.26■□□□□ 0.99
Trim27-201ENSMUST00000021761 Supt5hO55201 1082 aaKnown RBP21.22■□□□□ 0.99
Trim27-201ENSMUST00000021761 Rtl1Q7M732 1744 aa21.22■□□□□ 0.99
Trim27-201ENSMUST00000021761 Abcc8B2RUS7 1588 aa21.2■□□□□ 0.98
Trim27-201ENSMUST00000021761 Npm2Q80W85 207 aa21.18■□□□□ 0.98
Trim27-201ENSMUST00000021761 NefmP08553 848 aa21.1■□□□□ 0.97
Trim27-201ENSMUST00000021761 Ppargc1bQ8VHJ7 1014 aa21.06■□□□□ 0.96
Trim27-201ENSMUST00000021761 Zcchc6Q5BLK4 1491 aaKnown RBP20.95■□□□□ 0.94
Trim27-201ENSMUST00000021761 Ube2uB1AUC4 352 aa20.9■□□□□ 0.94
Trim27-201ENSMUST00000021761 Mier1Q5UAK0 511 aa20.77■□□□□ 0.92
Trim27-201ENSMUST00000021761 Gm35339A0A140LHH9 1649 aa20.75■□□□□ 0.91
Trim27-201ENSMUST00000021761 Cdk11bP24788 784 aaKnown RBP20.69■□□□□ 0.9
Trim27-201ENSMUST00000021761 CenpbP27790 599 aa20.64■□□□□ 0.89
Trim27-201ENSMUST00000021761 Neurod1Q60867 357 aa20.61■□□□□ 0.89
Trim27-201ENSMUST00000021761 Il27Q8K3I6 234 aa20.61■□□□□ 0.89
Trim27-201ENSMUST00000021761 Nop58Q6DFW4 536 aaKnown RBP20.6■□□□□ 0.89
Trim27-201ENSMUST00000021761 Chic1Q8CBW7 227 aa20.56■□□□□ 0.88
Trim27-201ENSMUST00000021761 Slc24a1Q91WD8 1130 aa20.55■□□□□ 0.88
Trim27-201ENSMUST00000021761 Ap3b1Q9Z1T1 1105 aa20.53■□□□□ 0.88
Trim27-201ENSMUST00000021761 Dcaf1Q80TR8 1506 aa20.47■□□□□ 0.87
Trim27-201ENSMUST00000021761 Sall2Q9QX96 1004 aa20.47■□□□□ 0.87
Trim27-201ENSMUST00000021761 Fam50aQ9WV03 339 aaKnown RBP20.33■□□□□ 0.85
Trim27-201ENSMUST00000021761 Plekhg3Q4VAC9 1341 aa20.32■□□□□ 0.84
Trim27-201ENSMUST00000021761 TonslQ6NZL6 1363 aa20.32■□□□□ 0.84
Trim27-201ENSMUST00000021761 Gm38655A0A286YDK6 273 aa20.28■□□□□ 0.84
Trim27-201ENSMUST00000021761 Cep164Q5DU05 1446 aa20.25■□□□□ 0.83
Trim27-201ENSMUST00000021761 NclP09405 707 aaKnown RBP20.21■□□□□ 0.83
Trim27-201ENSMUST00000021761 Csrnp3P59055 597 aa20.21■□□□□ 0.83
Trim27-201ENSMUST00000021761 Mapk8ip2Q9ERE9 830 aa20.19■□□□□ 0.82
Trim27-201ENSMUST00000021761 Rb1cc1Q9ESK9 1588 aa20.19■□□□□ 0.82
Trim27-201ENSMUST00000021761 Pelp1Q9DBD5 1123 aaKnown RBP20.18■□□□□ 0.82
Trim27-201ENSMUST00000021761 Eid3Q3V124 375 aa20.18■□□□□ 0.82
Trim27-201ENSMUST00000021761 ClspnQ80YR7 1315 aa20.12■□□□□ 0.81
Trim27-201ENSMUST00000021761 Stra8P70278 393 aa20.1■□□□□ 0.81
Trim27-201ENSMUST00000021761 Lmod2Q3UHZ5 550 aa20.02■□□□□ 0.8
Trim27-201ENSMUST00000021761 Anks4bQ8K3X6 423 aa20.01■□□□□ 0.79
Trim27-201ENSMUST00000021761 Eif5bQ05D44 1216 aaKnown RBP20.01■□□□□ 0.79
Trim27-201ENSMUST00000021761 Aebp2Q9Z248 504 aaKnown RBP19.99■□□□□ 0.79
Trim27-201ENSMUST00000021761 Tnnt3Q9QZ47 272 aa19.93■□□□□ 0.78
Trim27-201ENSMUST00000021761 Brd4Q9ESU6 1400 aaKnown RBP19.91■□□□□ 0.78
Trim27-201ENSMUST00000021761 Ttbk1Q6PCN3 1308 aa19.9■□□□□ 0.78
Trim27-201ENSMUST00000021761 1700123L14RikQ3V2K7 440 aa19.83■□□□□ 0.77
Trim27-201ENSMUST00000021761 Clip1Q922J3 1391 aa19.83■□□□□ 0.77
Trim27-201ENSMUST00000021761 Rsf1E9PWW9 1441 aaKnown RBP19.79■□□□□ 0.76
Trim27-201ENSMUST00000021761 NrdcQ8BHG1 1161 aa19.78■□□□□ 0.76
Trim27-201ENSMUST00000021761 Baz1aO88379 1555 aa19.73■□□□□ 0.75
Trim27-201ENSMUST00000021761 Myt1Q8CFC2 1127 aa19.73■□□□□ 0.75
Trim27-201ENSMUST00000021761 Amer1Q7TS75 1132 aa19.68■□□□□ 0.74
Trim27-201ENSMUST00000021761 Aplp2Q06335 707 aa19.65■□□□□ 0.74
Trim27-201ENSMUST00000021761 NacadQ5SWP3 1504 aa19.57■□□□□ 0.72
Trim27-201ENSMUST00000021761 Zbtb7cQ8VCZ7 619 aa19.56■□□□□ 0.72
Trim27-201ENSMUST00000021761 Golga3P55937 1487 aa19.55■□□□□ 0.72
Trim27-201ENSMUST00000021761 Ccdc88bQ4QRL3 1481 aa19.55■□□□□ 0.72
Trim27-201ENSMUST00000021761 Npm1Q61937 292 aaKnown RBP19.55■□□□□ 0.72
Trim27-201ENSMUST00000021761 Kdm5dQ62240 1548 aa19.52■□□□□ 0.72
Trim27-201ENSMUST00000021761 Zbtb4Q5F293 982 aa19.5■□□□□ 0.71
Trim27-201ENSMUST00000021761 Anp32aO35381 247 aa19.49■□□□□ 0.71
Trim27-201ENSMUST00000021761 Chic2Q9D9G3 165 aa19.41■□□□□ 0.7
Trim27-201ENSMUST00000021761 BlmO88700 1416 aa19.38■□□□□ 0.69
Trim27-201ENSMUST00000021761 SafbD3YXK2 937 aaKnown RBP19.38■□□□□ 0.69
Trim27-201ENSMUST00000021761 4933416C03RikQ3V063 378 aa19.36■□□□□ 0.69
Trim27-201ENSMUST00000021761 Anp32bQ9EST5 272 aaKnown RBP19.36■□□□□ 0.69
Trim27-201ENSMUST00000021761 NeflP08551 543 aa19.35■□□□□ 0.69
Trim27-201ENSMUST00000021761 Calr4Q3TQS0 420 aa19.34■□□□□ 0.69
Trim27-201ENSMUST00000021761 Fam71e1A1L3C1 212 aa19.33■□□□□ 0.68
Trim27-201ENSMUST00000021761 Setd5Q5XJV7 1441 aa19.32■□□□□ 0.68
Trim27-201ENSMUST00000021761 Hnrnpul2Q00PI9 745 aaKnown RBP19.32■□□□□ 0.68
Trim27-201ENSMUST00000021761 DiexfQ8BTT6 772 aaKnown RBP19.31■□□□□ 0.68
Trim27-201ENSMUST00000021761 Ppp4r2Q0VGB7 417 aa19.29■□□□□ 0.68
Trim27-201ENSMUST00000021761 Os9Q8K2C7 672 aa19.27■□□□□ 0.68
Trim27-201ENSMUST00000021761 Mrs2Q5NCE8 434 aa19.24■□□□□ 0.67
Trim27-201ENSMUST00000021761 P3h3Q8CG70 732 aa19.2■□□□□ 0.66
Trim27-201ENSMUST00000021761 Fkbp15Q6P9Q6 1216 aaKnown RBP19.16■□□□□ 0.66
Trim27-201ENSMUST00000021761 Rtl5Q5DTT4 599 aa19.15■□□□□ 0.66
Trim27-201ENSMUST00000021761 Prdm10Q3UTQ7 1184 aa19.14■□□□□ 0.65
Trim27-201ENSMUST00000021761 Ccer2J3QPU5 274 aa19.12■□□□□ 0.65
Trim27-201ENSMUST00000021761 Cecr2E9Q2Z1 1453 aa19.11■□□□□ 0.65
Trim27-201ENSMUST00000021761 Ubl4bQ9CQ84 188 aa19.11■□□□□ 0.65
Trim27-201ENSMUST00000021761 Eea1Q8BL66 1411 aa19.08■□□□□ 0.64
Trim27-201ENSMUST00000021761 Hspa5P20029 655 aaKnown RBP19.08■□□□□ 0.64
Trim27-201ENSMUST00000021761 Wdr43Q6ZQL4 677 aaKnown RBP19.08■□□□□ 0.64
Trim27-201ENSMUST00000021761 Cep162Q6ZQ06 1403 aa19.08■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms