RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 CckP09240 115 aa4.78□□□□□ -1.64
Hmgb1-202ENSMUST00000093196 Cox7bP56393 80 aa4.77□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 Spata45Q9CVW4 97 aa4.77□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 Rpl32-psP17932 135 aa4.76□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 Spink13Q3UTS8 97 aa4.76□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 A930002H24RikQ8C8Y3 163 aa4.76□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 Igkv8-18A0A0B4J1J3 123 aa4.75□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 Gm10770F7D043 238 aa4.75□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 SelenowP63300 88 aa4.75□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 CenpwQ3URR0 86 aa4.75□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 Gm39115A0A1B0GSH7 232 aa4.74□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 Mp68P56379 58 aa4.74□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 Rab37Q9JKM7 223 aa4.74□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 Igkv8-21A0A140T8P7 120 aa4.73□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 Gm5153P01627 120 aa4.73□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 Igkv1-122A0A140T8M9 119 aa4.72□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 Defb37Q7TMD2 62 aa4.72□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 Limd2Q8BGB5 128 aa4.72□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 Defb29Q8BGW9 78 aa4.72□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 Q8BT88 171 aa4.72□□□□□ -1.65
Hmgb1-202ENSMUST00000093196 Gm9805F6YK59 57 aa4.71□□□□□ -1.66
Hmgb1-202ENSMUST00000093196 Igkv3-4A0A140T8Q4 119 aa4.7□□□□□ -1.66
Hmgb1-202ENSMUST00000093196 Gm10135F6TEE5 83 aa4.7□□□□□ -1.66
Hmgb1-202ENSMUST00000093196 Mtatp8P03930 67 aa4.7□□□□□ -1.66
Hmgb1-202ENSMUST00000093196 NrepQ07475 68 aa4.7□□□□□ -1.66
Hmgb1-202ENSMUST00000093196 Defb47Q30KN1 79 aa4.7□□□□□ -1.66
Hmgb1-202ENSMUST00000093196 Trav3-4A0A075B654 114 aa4.69□□□□□ -1.66
Hmgb1-202ENSMUST00000093196 Gm29735A0A1B0GT06 219 aa4.69□□□□□ -1.66
Hmgb1-202ENSMUST00000093196 Sprr2iO70560 76 aa4.69□□□□□ -1.66
Hmgb1-202ENSMUST00000093196 Smim26Q3V460 107 aa4.69□□□□□ -1.66
Hmgb1-202ENSMUST00000093196 Cox6cQ9CPQ1 76 aa4.69□□□□□ -1.66
Hmgb1-202ENSMUST00000093196 Igkv1-35A0A0G2JDE5 120 aa4.68□□□□□ -1.66
Hmgb1-202ENSMUST00000093196 Gm9112A2AI92 75 aa4.68□□□□□ -1.66
Hmgb1-202ENSMUST00000093196 AhnakE9Q616 5656 aaKnown RBP4.68□□□□□ -1.66
Hmgb1-202ENSMUST00000093196 Gm16381A0A1Y7VKT9 73 aa4.67□□□□□ -1.66
Hmgb1-202ENSMUST00000093196 Acyp1P56376 99 aa4.67□□□□□ -1.66
Hmgb1-202ENSMUST00000093196 Gm11568A2A4M2 211 aa4.66□□□□□ -1.66
Hmgb1-202ENSMUST00000093196 A0A286YE02 88 aa4.65□□□□□ -1.67
Hmgb1-202ENSMUST00000093196 1700020N15RikL7MTX3 112 aa4.65□□□□□ -1.67
Hmgb1-202ENSMUST00000093196 Gm29423A0A087WRM1 55 aa4.64□□□□□ -1.67
Hmgb1-202ENSMUST00000093196 Igkv4-58A0A0G2JGI6 119 aa4.64□□□□□ -1.67
Hmgb1-202ENSMUST00000093196 Lamtor3O88653 124 aa4.64□□□□□ -1.67
Hmgb1-202ENSMUST00000093196 Hint1P70349 126 aaKnown RBP4.64□□□□□ -1.67
Hmgb1-202ENSMUST00000093196 4930524J08RikQ9CUJ5 163 aa4.64□□□□□ -1.67
Hmgb1-202ENSMUST00000093196 Elof1P60003 83 aa4.63□□□□□ -1.67
Hmgb1-202ENSMUST00000093196 Gm45337A0A1B0GS71 263 aa4.62□□□□□ -1.67
Hmgb1-202ENSMUST00000093196 Dnal4Q9DCM4 105 aa4.62□□□□□ -1.67
Hmgb1-202ENSMUST00000093196 Pxt1Q8K459 51 aa4.61□□□□□ -1.67
Hmgb1-202ENSMUST00000093196 2310079G19RikQ9D6L6 185 aa4.61□□□□□ -1.67
Hmgb1-202ENSMUST00000093196 Xlr5cQ9JJR2 179 aa4.61□□□□□ -1.67
Hmgb1-202ENSMUST00000093196 Gm45618A0A1B0GSA0 219 aa4.6□□□□□ -1.67
Hmgb1-202ENSMUST00000093196 Gm26920S4R2A5 56 aa4.6□□□□□ -1.67
Hmgb1-202ENSMUST00000093196 Gm16253D3Z167 63 aa4.58□□□□□ -1.68
Hmgb1-202ENSMUST00000093196 Sigmar1O55242 223 aa4.58□□□□□ -1.68
Hmgb1-202ENSMUST00000093196 Rpl39lQ9CQD0 51 aa4.58□□□□□ -1.68
Hmgb1-202ENSMUST00000093196 Gm19426M0QWC7 77 aa4.57□□□□□ -1.68
Hmgb1-202ENSMUST00000093196 Gm17416Q30KP4 66 aa4.57□□□□□ -1.68
Hmgb1-202ENSMUST00000093196 Gm45213A0A0U1RNZ6 101 aa4.55□□□□□ -1.68
Hmgb1-202ENSMUST00000093196 1700018G05RikA0A1B0GSI2 66 aa4.55□□□□□ -1.68
Hmgb1-202ENSMUST00000093196 Gtf2h5Q8K2X8 71 aa4.55□□□□□ -1.68
Hmgb1-202ENSMUST00000093196 9530003J23RikQ8BM26 151 aa4.53□□□□□ -1.68
Hmgb1-202ENSMUST00000093196 4933428G20RikQ9D3X4 101 aa4.53□□□□□ -1.68
Hmgb1-202ENSMUST00000093196 Vps25Q9CQ80 176 aa4.52□□□□□ -1.69
Hmgb1-202ENSMUST00000093196 Pde6gP09174 87 aa4.51□□□□□ -1.69
Hmgb1-202ENSMUST00000093196 Xcl1P47993 114 aa4.51□□□□□ -1.69
Hmgb1-202ENSMUST00000093196 Igkv8-19A0A0G2JFN8 121 aa4.5□□□□□ -1.69
Hmgb1-202ENSMUST00000093196 Gm10153A0A1B0GRL1 320 aa4.5□□□□□ -1.69
Hmgb1-202ENSMUST00000093196 Gm10401E9Q3K6 71 aa4.5□□□□□ -1.69
Hmgb1-202ENSMUST00000093196 Igkv8-27A0A0G2JF28 120 aa4.49□□□□□ -1.69
Hmgb1-202ENSMUST00000093196 Trav14d-3-dv8A0A075B619 120 aa4.46□□□□□ -1.7
Hmgb1-202ENSMUST00000093196 Sprr2jO70561 109 aa4.46□□□□□ -1.7
Hmgb1-202ENSMUST00000093196 Rbm3O89086 153 aaKnown RBP4.46□□□□□ -1.7
Hmgb1-202ENSMUST00000093196 P06320 134 aa4.46□□□□□ -1.7
Hmgb1-202ENSMUST00000093196 Cox6a2P43023 97 aa4.46□□□□□ -1.7
Hmgb1-202ENSMUST00000093196 Trav3-1Q5R1I8 114 aa4.46□□□□□ -1.7
Hmgb1-202ENSMUST00000093196 Gm37013Q8K491 104 aa4.45□□□□□ -1.7
Hmgb1-202ENSMUST00000093196 Lyrm7Q9DA03 104 aa4.45□□□□□ -1.7
Hmgb1-202ENSMUST00000093196 Cypt15B1AXS0 87 aa4.43□□□□□ -1.7
Hmgb1-202ENSMUST00000093196 Ormdl1Q921I0 153 aa4.43□□□□□ -1.7
Hmgb1-202ENSMUST00000093196 Gm40193A0A1B0GT39 78 aa4.42□□□□□ -1.7
Hmgb1-202ENSMUST00000093196 Sfta2E9PXB6 77 aa4.41□□□□□ -1.7
Hmgb1-202ENSMUST00000093196 Tmem213Q08EA8 116 aa4.41□□□□□ -1.7
Hmgb1-202ENSMUST00000093196 Gm28539A0A087WSL9 92 aa4.4□□□□□ -1.71
Hmgb1-202ENSMUST00000093196 Gm19935A0A1B0GSF9 52 aa4.39□□□□□ -1.71
Hmgb1-202ENSMUST00000093196 Sprr2fO70557 76 aa4.39□□□□□ -1.71
Hmgb1-202ENSMUST00000093196 Gm10643Q3URG9 111 aa4.39□□□□□ -1.71
Hmgb1-202ENSMUST00000093196 Igkv3-3A0A140T8Q0 119 aa4.37□□□□□ -1.71
Hmgb1-202ENSMUST00000093196 Gm40460A0A1B0GR10 244 aa4.37□□□□□ -1.71
Hmgb1-202ENSMUST00000093196 Gm7579A0A1B0GRJ4 243 aa4.37□□□□□ -1.71
Hmgb1-202ENSMUST00000093196 Krtap5-5Q2TA51 241 aa4.37□□□□□ -1.71
Hmgb1-202ENSMUST00000093196 Krtap5-4Q62220 223 aa4.37□□□□□ -1.71
Hmgb1-202ENSMUST00000093196 Tmem254aP0DN89 123 aa4.36□□□□□ -1.71
Hmgb1-202ENSMUST00000093196 Tmem254bP0DN90 123 aa4.36□□□□□ -1.71
Hmgb1-202ENSMUST00000093196 Tmem254cP0DN91 123 aa4.36□□□□□ -1.71
Hmgb1-202ENSMUST00000093196 Defa21Q8C1P2 93 aa4.36□□□□□ -1.71
Hmgb1-202ENSMUST00000093196 Lce3dE9Q8V1 98 aa4.35□□□□□ -1.71
Hmgb1-202ENSMUST00000093196 Lce3aQ497I5 98 aa4.35□□□□□ -1.71
Hmgb1-202ENSMUST00000093196 Ubl5Q9EPV8 73 aa4.35□□□□□ -1.71
Hmgb1-202ENSMUST00000093196 Atp5eP56382 52 aa4.33□□□□□ -1.72
Hmgb1-202ENSMUST00000093196 UqcrqQ9CQ69 82 aa4.33□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms