Protein–RNA interactions for Protein: A0A1B0GSF9

Gm19935, Predicted gene, 19935, mousemouse

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm19935A0A1B0GSF9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm19935A0A1B0GSF9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm19935A0A1B0GSF9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm19935A0A1B0GSF9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Gm19935A0A1B0GSF9 Psd-208ENSMUST00000224556 2034 ntBASIC19.26■□□□□ 0.67
Gm19935A0A1B0GSF9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm19935A0A1B0GSF9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Gm19935A0A1B0GSF9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Gm19935A0A1B0GSF9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm19935A0A1B0GSF9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm19935A0A1B0GSF9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm19935A0A1B0GSF9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm19935A0A1B0GSF9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm19935A0A1B0GSF9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm19935A0A1B0GSF9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm19935A0A1B0GSF9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm19935A0A1B0GSF9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm19935A0A1B0GSF9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm19935A0A1B0GSF9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm19935A0A1B0GSF9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm19935A0A1B0GSF9 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.36■□□□□ 0.53
Gm19935A0A1B0GSF9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Gm19935A0A1B0GSF9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Gm19935A0A1B0GSF9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Gm19935A0A1B0GSF9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.07■□□□□ 0.48
Gm19935A0A1B0GSF9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm19935A0A1B0GSF9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm19935A0A1B0GSF9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm19935A0A1B0GSF9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm19935A0A1B0GSF9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm19935A0A1B0GSF9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm19935A0A1B0GSF9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm19935A0A1B0GSF9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm19935A0A1B0GSF9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm19935A0A1B0GSF9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm19935A0A1B0GSF9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm19935A0A1B0GSF9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm19935A0A1B0GSF9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm19935A0A1B0GSF9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm19935A0A1B0GSF9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm19935A0A1B0GSF9 Zxda-201ENSMUST00000117281 2621 ntBASIC17.57■□□□□ 0.4
Gm19935A0A1B0GSF9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gm19935A0A1B0GSF9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm19935A0A1B0GSF9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm19935A0A1B0GSF9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm19935A0A1B0GSF9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gm19935A0A1B0GSF9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm19935A0A1B0GSF9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm19935A0A1B0GSF9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Gm19935A0A1B0GSF9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.39■□□□□ 0.37
Gm19935A0A1B0GSF9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm19935A0A1B0GSF9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm19935A0A1B0GSF9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm19935A0A1B0GSF9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Gm19935A0A1B0GSF9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm19935A0A1B0GSF9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm19935A0A1B0GSF9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm19935A0A1B0GSF9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm19935A0A1B0GSF9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Gm19935A0A1B0GSF9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC17.18■□□□□ 0.34
Gm19935A0A1B0GSF9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm19935A0A1B0GSF9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm19935A0A1B0GSF9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm19935A0A1B0GSF9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Gm19935A0A1B0GSF9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm19935A0A1B0GSF9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm19935A0A1B0GSF9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm19935A0A1B0GSF9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm19935A0A1B0GSF9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm19935A0A1B0GSF9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.03■□□□□ 0.32
Gm19935A0A1B0GSF9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm19935A0A1B0GSF9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Gm19935A0A1B0GSF9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm19935A0A1B0GSF9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm19935A0A1B0GSF9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Gm19935A0A1B0GSF9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm19935A0A1B0GSF9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm19935A0A1B0GSF9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm19935A0A1B0GSF9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm19935A0A1B0GSF9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm19935A0A1B0GSF9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Gm19935A0A1B0GSF9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm19935A0A1B0GSF9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm19935A0A1B0GSF9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm19935A0A1B0GSF9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm19935A0A1B0GSF9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm19935A0A1B0GSF9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Gm19935A0A1B0GSF9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm19935A0A1B0GSF9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm19935A0A1B0GSF9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm19935A0A1B0GSF9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm19935A0A1B0GSF9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm19935A0A1B0GSF9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm19935A0A1B0GSF9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gm19935A0A1B0GSF9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm19935A0A1B0GSF9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC16.68■□□□□ 0.26
Gm19935A0A1B0GSF9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm19935A0A1B0GSF9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm19935A0A1B0GSF9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Gm19935A0A1B0GSF9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms