Protein–RNA interactions for Protein: Q8BGW9

Defb29, Beta-defensin 29, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb29Q8BGW9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Defb29Q8BGW9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Defb29Q8BGW9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Defb29Q8BGW9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Defb29Q8BGW9 Psd-208ENSMUST00000224556 2034 ntBASIC21.28■■□□□ 1
Defb29Q8BGW9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Defb29Q8BGW9 Gm25239-201ENSMUST00000174915 86 ntBASIC21.01■□□□□ 0.95
Defb29Q8BGW9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Defb29Q8BGW9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Defb29Q8BGW9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Defb29Q8BGW9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Defb29Q8BGW9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Defb29Q8BGW9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Defb29Q8BGW9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Defb29Q8BGW9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Defb29Q8BGW9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Defb29Q8BGW9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Defb29Q8BGW9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Defb29Q8BGW9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Defb29Q8BGW9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Defb29Q8BGW9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Defb29Q8BGW9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.61■□□□□ 0.73
Defb29Q8BGW9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Defb29Q8BGW9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Defb29Q8BGW9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Defb29Q8BGW9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Defb29Q8BGW9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Defb29Q8BGW9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Defb29Q8BGW9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.34■□□□□ 0.69
Defb29Q8BGW9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Defb29Q8BGW9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.29■□□□□ 0.68
Defb29Q8BGW9 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.25■□□□□ 0.67
Defb29Q8BGW9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Defb29Q8BGW9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Defb29Q8BGW9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Defb29Q8BGW9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Defb29Q8BGW9 Gm15042-201ENSMUST00000120212 883 ntBASIC19.1■□□□□ 0.65
Defb29Q8BGW9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Defb29Q8BGW9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Defb29Q8BGW9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Defb29Q8BGW9 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.01■□□□□ 0.63
Defb29Q8BGW9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Defb29Q8BGW9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Defb29Q8BGW9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Defb29Q8BGW9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Defb29Q8BGW9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Defb29Q8BGW9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.94■□□□□ 0.62
Defb29Q8BGW9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Defb29Q8BGW9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Defb29Q8BGW9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Defb29Q8BGW9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Defb29Q8BGW9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.85■□□□□ 0.61
Defb29Q8BGW9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Defb29Q8BGW9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Defb29Q8BGW9 Gm15045-201ENSMUST00000117359 883 ntBASIC18.77■□□□□ 0.6
Defb29Q8BGW9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Defb29Q8BGW9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Defb29Q8BGW9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Defb29Q8BGW9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.6■□□□□ 0.57
Defb29Q8BGW9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Defb29Q8BGW9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Defb29Q8BGW9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Defb29Q8BGW9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.53■□□□□ 0.56
Defb29Q8BGW9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Defb29Q8BGW9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Defb29Q8BGW9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Defb29Q8BGW9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Defb29Q8BGW9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Defb29Q8BGW9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Defb29Q8BGW9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Defb29Q8BGW9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Defb29Q8BGW9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Defb29Q8BGW9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Defb29Q8BGW9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Defb29Q8BGW9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.33■□□□□ 0.52
Defb29Q8BGW9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defb29Q8BGW9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Defb29Q8BGW9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Defb29Q8BGW9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Defb29Q8BGW9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Defb29Q8BGW9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Defb29Q8BGW9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Defb29Q8BGW9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Defb29Q8BGW9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Defb29Q8BGW9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.26■□□□□ 0.51
Defb29Q8BGW9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Defb29Q8BGW9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Defb29Q8BGW9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Defb29Q8BGW9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Defb29Q8BGW9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.2■□□□□ 0.5
Defb29Q8BGW9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Defb29Q8BGW9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Defb29Q8BGW9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Defb29Q8BGW9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Defb29Q8BGW9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.14■□□□□ 0.49
Defb29Q8BGW9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Defb29Q8BGW9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Defb29Q8BGW9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Defb29Q8BGW9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Defb29Q8BGW9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms