Protein–RNA interactions for Protein: P60003

Elof1, Transcription elongation factor 1 homolog, mousemouse

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Elof1P60003 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Elof1P60003 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Elof1P60003 Gm25239-201ENSMUST00000174915 86 ntBASIC21.21■□□□□ 0.99
Elof1P60003 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Elof1P60003 Psd-208ENSMUST00000224556 2034 ntBASIC20.66■□□□□ 0.9
Elof1P60003 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Elof1P60003 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Elof1P60003 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Elof1P60003 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Elof1P60003 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Elof1P60003 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Elof1P60003 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Elof1P60003 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Elof1P60003 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Elof1P60003 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.42■□□□□ 0.7
Elof1P60003 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Elof1P60003 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Elof1P60003 Gm15042-201ENSMUST00000120212 883 ntBASIC19.27■□□□□ 0.68
Elof1P60003 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Elof1P60003 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Elof1P60003 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Elof1P60003 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Elof1P60003 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Elof1P60003 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Elof1P60003 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Elof1P60003 Gm15045-201ENSMUST00000117359 883 ntBASIC18.95■□□□□ 0.62
Elof1P60003 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Elof1P60003 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18.83■□□□□ 0.6
Elof1P60003 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Elof1P60003 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.79■□□□□ 0.6
Elof1P60003 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.77■□□□□ 0.6
Elof1P60003 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Elof1P60003 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Elof1P60003 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Elof1P60003 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Elof1P60003 Gm10524-201ENSMUST00000181931 1893 ntBASIC18.66■□□□□ 0.58
Elof1P60003 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Elof1P60003 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Elof1P60003 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Elof1P60003 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.53■□□□□ 0.56
Elof1P60003 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.53■□□□□ 0.56
Elof1P60003 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Elof1P60003 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.47■□□□□ 0.55
Elof1P60003 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Elof1P60003 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Elof1P60003 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Elof1P60003 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Elof1P60003 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Elof1P60003 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Elof1P60003 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Elof1P60003 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Elof1P60003 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Elof1P60003 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Elof1P60003 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Elof1P60003 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Elof1P60003 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Elof1P60003 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Elof1P60003 Gm24109-201ENSMUST00000175489 103 ntBASIC18.04■□□□□ 0.48
Elof1P60003 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.03■□□□□ 0.48
Elof1P60003 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Elof1P60003 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Elof1P60003 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Elof1P60003 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Elof1P60003 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Elof1P60003 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Elof1P60003 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Elof1P60003 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Elof1P60003 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Elof1P60003 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Elof1P60003 Gm23366-201ENSMUST00000175022 89 ntBASIC17.85■□□□□ 0.45
Elof1P60003 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Elof1P60003 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Elof1P60003 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Elof1P60003 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Elof1P60003 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Elof1P60003 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Elof1P60003 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Elof1P60003 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Elof1P60003 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Elof1P60003 AC153911.1-202ENSMUST00000218534 1034 ntBASIC17.68■□□□□ 0.42
Elof1P60003 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Elof1P60003 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Elof1P60003 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Elof1P60003 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC17.61■□□□□ 0.41
Elof1P60003 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Elof1P60003 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Elof1P60003 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Elof1P60003 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Elof1P60003 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Elof1P60003 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Elof1P60003 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Elof1P60003 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Elof1P60003 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Elof1P60003 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Elof1P60003 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Elof1P60003 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Elof1P60003 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Elof1P60003 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Elof1P60003 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Elof1P60003 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms