Protein–RNA interactions for Protein: Q30KP4

Gm17416, Beta-defensin (Fragment), mousemouse

Predictions only

Length 66 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17416Q30KP4 Gm25239-201ENSMUST00000174915 86 ntBASIC18.75■□□□□ 0.59
Gm17416Q30KP4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm17416Q30KP4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm17416Q30KP4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm17416Q30KP4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm17416Q30KP4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Gm17416Q30KP4 Gm15042-201ENSMUST00000120212 883 ntBASIC16.72■□□□□ 0.27
Gm17416Q30KP4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm17416Q30KP4 Gm15045-201ENSMUST00000117359 883 ntBASIC16.37■□□□□ 0.21
Gm17416Q30KP4 Psd-208ENSMUST00000224556 2034 ntBASIC16.32■□□□□ 0.2
Gm17416Q30KP4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17416Q30KP4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17416Q30KP4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm17416Q30KP4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC16.09■□□□□ 0.17
Gm17416Q30KP4 Gm24109-201ENSMUST00000175489 103 ntBASIC16.09■□□□□ 0.17
Gm17416Q30KP4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm17416Q30KP4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm17416Q30KP4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm17416Q30KP4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gm17416Q30KP4 Gm23366-201ENSMUST00000175022 89 ntBASIC15.76■□□□□ 0.11
Gm17416Q30KP4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm17416Q30KP4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Gm17416Q30KP4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm17416Q30KP4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC15.71■□□□□ 0.11
Gm17416Q30KP4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm17416Q30KP4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm17416Q30KP4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm17416Q30KP4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm17416Q30KP4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm17416Q30KP4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm17416Q30KP4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC15.55■□□□□ 0.08
Gm17416Q30KP4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm17416Q30KP4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Gm17416Q30KP4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm17416Q30KP4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm17416Q30KP4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm17416Q30KP4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm17416Q30KP4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC15.32■□□□□ 0.04
Gm17416Q30KP4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm17416Q30KP4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm17416Q30KP4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm17416Q30KP4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm17416Q30KP4 Gm10524-201ENSMUST00000181931 1893 ntBASIC15.12■□□□□ 0.01
Gm17416Q30KP4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC15.08■□□□□ 0.01
Gm17416Q30KP4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm17416Q30KP4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gm17416Q30KP4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm17416Q30KP4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gm17416Q30KP4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm17416Q30KP4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Gm17416Q30KP4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm17416Q30KP4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm17416Q30KP4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm17416Q30KP4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm17416Q30KP4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC14.81□□□□□ -0.04
Gm17416Q30KP4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm17416Q30KP4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC14.78□□□□□ -0.04
Gm17416Q30KP4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Gm17416Q30KP4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Gm17416Q30KP4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm17416Q30KP4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm17416Q30KP4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm17416Q30KP4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC14.73□□□□□ -0.05
Gm17416Q30KP4 Gm27325-201ENSMUST00000175467 74 ntBASIC14.73□□□□□ -0.05
Gm17416Q30KP4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Gm17416Q30KP4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC14.7□□□□□ -0.06
Gm17416Q30KP4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Gm17416Q30KP4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Gm17416Q30KP4 Gm25238-201ENSMUST00000174914 89 ntBASIC14.68□□□□□ -0.06
Gm17416Q30KP4 Gm42596-201ENSMUST00000196305 1958 ntBASIC14.67□□□□□ -0.06
Gm17416Q30KP4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gm17416Q30KP4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC14.6□□□□□ -0.07
Gm17416Q30KP4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm17416Q30KP4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm17416Q30KP4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Gm17416Q30KP4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm17416Q30KP4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Gm17416Q30KP4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm17416Q30KP4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm17416Q30KP4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm17416Q30KP4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Gm17416Q30KP4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC14.43□□□□□ -0.1
Gm17416Q30KP4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC14.41□□□□□ -0.1
Gm17416Q30KP4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC14.41□□□□□ -0.1
Gm17416Q30KP4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm17416Q30KP4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC14.4□□□□□ -0.1
Gm17416Q30KP4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm17416Q30KP4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm17416Q30KP4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm17416Q30KP4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm17416Q30KP4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm17416Q30KP4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gm17416Q30KP4 Rab21-202ENSMUST00000218831 843 ntBASIC14.28□□□□□ -0.12
Gm17416Q30KP4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Gm17416Q30KP4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm17416Q30KP4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm17416Q30KP4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm17416Q30KP4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm17416Q30KP4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC14.24□□□□□ -0.13
Gm17416Q30KP4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms