Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Igkv3-3A0A140T8Q0 Gm25239-201ENSMUST00000174915 86 ntBASIC19.6■□□□□ 0.73
Igkv3-3A0A140T8Q0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Igkv3-3A0A140T8Q0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Igkv3-3A0A140T8Q0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv3-3A0A140T8Q0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv3-3A0A140T8Q0 Psd-208ENSMUST00000224556 2034 ntBASIC18.67■□□□□ 0.58
Igkv3-3A0A140T8Q0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv3-3A0A140T8Q0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Igkv3-3A0A140T8Q0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Igkv3-3A0A140T8Q0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv3-3A0A140T8Q0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv3-3A0A140T8Q0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv3-3A0A140T8Q0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Igkv3-3A0A140T8Q0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv3-3A0A140T8Q0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv3-3A0A140T8Q0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv3-3A0A140T8Q0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv3-3A0A140T8Q0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv3-3A0A140T8Q0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv3-3A0A140T8Q0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv3-3A0A140T8Q0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv3-3A0A140T8Q0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Igkv3-3A0A140T8Q0 Gm15042-201ENSMUST00000120212 883 ntBASIC17.65■□□□□ 0.42
Igkv3-3A0A140T8Q0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Igkv3-3A0A140T8Q0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.59■□□□□ 0.41
Igkv3-3A0A140T8Q0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv3-3A0A140T8Q0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv3-3A0A140T8Q0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv3-3A0A140T8Q0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC17.5■□□□□ 0.39
Igkv3-3A0A140T8Q0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv3-3A0A140T8Q0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv3-3A0A140T8Q0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv3-3A0A140T8Q0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv3-3A0A140T8Q0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Igkv3-3A0A140T8Q0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Igkv3-3A0A140T8Q0 Gm15045-201ENSMUST00000117359 883 ntBASIC17.22■□□□□ 0.35
Igkv3-3A0A140T8Q0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv3-3A0A140T8Q0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv3-3A0A140T8Q0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv3-3A0A140T8Q0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv3-3A0A140T8Q0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv3-3A0A140T8Q0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Igkv3-3A0A140T8Q0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv3-3A0A140T8Q0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.03■□□□□ 0.32
Igkv3-3A0A140T8Q0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv3-3A0A140T8Q0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Igkv3-3A0A140T8Q0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC16.94■□□□□ 0.3
Igkv3-3A0A140T8Q0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Igkv3-3A0A140T8Q0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC16.91■□□□□ 0.3
Igkv3-3A0A140T8Q0 Gm10524-201ENSMUST00000181931 1893 ntBASIC16.9■□□□□ 0.3
Igkv3-3A0A140T8Q0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv3-3A0A140T8Q0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv3-3A0A140T8Q0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv3-3A0A140T8Q0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv3-3A0A140T8Q0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv3-3A0A140T8Q0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv3-3A0A140T8Q0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv3-3A0A140T8Q0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Igkv3-3A0A140T8Q0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv3-3A0A140T8Q0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv3-3A0A140T8Q0 Gm42596-201ENSMUST00000196305 1958 ntBASIC16.81■□□□□ 0.28
Igkv3-3A0A140T8Q0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Igkv3-3A0A140T8Q0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv3-3A0A140T8Q0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv3-3A0A140T8Q0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv3-3A0A140T8Q0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Igkv3-3A0A140T8Q0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC16.76■□□□□ 0.27
Igkv3-3A0A140T8Q0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv3-3A0A140T8Q0 Gm24109-201ENSMUST00000175489 103 ntBASIC16.71■□□□□ 0.27
Igkv3-3A0A140T8Q0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv3-3A0A140T8Q0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv3-3A0A140T8Q0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv3-3A0A140T8Q0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Igkv3-3A0A140T8Q0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC16.69■□□□□ 0.26
Igkv3-3A0A140T8Q0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv3-3A0A140T8Q0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv3-3A0A140T8Q0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv3-3A0A140T8Q0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv3-3A0A140T8Q0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv3-3A0A140T8Q0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv3-3A0A140T8Q0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv3-3A0A140T8Q0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv3-3A0A140T8Q0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Igkv3-3A0A140T8Q0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv3-3A0A140T8Q0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv3-3A0A140T8Q0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv3-3A0A140T8Q0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv3-3A0A140T8Q0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv3-3A0A140T8Q0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv3-3A0A140T8Q0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv3-3A0A140T8Q0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Igkv3-3A0A140T8Q0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv3-3A0A140T8Q0 Gm23366-201ENSMUST00000175022 89 ntBASIC16.5■□□□□ 0.23
Igkv3-3A0A140T8Q0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Igkv3-3A0A140T8Q0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv3-3A0A140T8Q0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv3-3A0A140T8Q0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv3-3A0A140T8Q0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv3-3A0A140T8Q0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms