Protein–RNA interactions for Protein: Q3URG9

Gm10643, Predicted gene 10643, mousemouse

Predictions only

Length 111 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10643Q3URG9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm10643Q3URG9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm10643Q3URG9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Gm10643Q3URG9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm10643Q3URG9 Psd-208ENSMUST00000224556 2034 ntBASIC17.92■□□□□ 0.46
Gm10643Q3URG9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm10643Q3URG9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Gm10643Q3URG9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Gm10643Q3URG9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm10643Q3URG9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10643Q3URG9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm10643Q3URG9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm10643Q3URG9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm10643Q3URG9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm10643Q3URG9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm10643Q3URG9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm10643Q3URG9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm10643Q3URG9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm10643Q3URG9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm10643Q3URG9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm10643Q3URG9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm10643Q3URG9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm10643Q3URG9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm10643Q3URG9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm10643Q3URG9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm10643Q3URG9 Gm25239-201ENSMUST00000174915 86 ntBASIC16.55■□□□□ 0.24
Gm10643Q3URG9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Gm10643Q3URG9 Gm42596-201ENSMUST00000196305 1958 ntBASIC16.48■□□□□ 0.23
Gm10643Q3URG9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10643Q3URG9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm10643Q3URG9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10643Q3URG9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm10643Q3URG9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm10643Q3URG9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10643Q3URG9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm10643Q3URG9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Gm10643Q3URG9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm10643Q3URG9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm10643Q3URG9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Gm10643Q3URG9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Gm10643Q3URG9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC16.02■□□□□ 0.16
Gm10643Q3URG9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm10643Q3URG9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm10643Q3URG9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Gm10643Q3URG9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm10643Q3URG9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Gm10643Q3URG9 Gm10524-201ENSMUST00000181931 1893 ntBASIC15.92■□□□□ 0.14
Gm10643Q3URG9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm10643Q3URG9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm10643Q3URG9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm10643Q3URG9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm10643Q3URG9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm10643Q3URG9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC15.79■□□□□ 0.12
Gm10643Q3URG9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm10643Q3URG9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10643Q3URG9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10643Q3URG9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm10643Q3URG9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Gm10643Q3URG9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm10643Q3URG9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm10643Q3URG9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm10643Q3URG9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC15.6■□□□□ 0.09
Gm10643Q3URG9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC15.59■□□□□ 0.09
Gm10643Q3URG9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm10643Q3URG9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm10643Q3URG9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm10643Q3URG9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm10643Q3URG9 Zxda-201ENSMUST00000117281 2621 ntBASIC15.53■□□□□ 0.08
Gm10643Q3URG9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC15.53■□□□□ 0.08
Gm10643Q3URG9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Gm10643Q3URG9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm10643Q3URG9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm10643Q3URG9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm10643Q3URG9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Gm10643Q3URG9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC15.42■□□□□ 0.06
Gm10643Q3URG9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC15.42■□□□□ 0.06
Gm10643Q3URG9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm10643Q3URG9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm10643Q3URG9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm10643Q3URG9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm10643Q3URG9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC15.35■□□□□ 0.05
Gm10643Q3URG9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm10643Q3URG9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm10643Q3URG9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm10643Q3URG9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Gm10643Q3URG9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm10643Q3URG9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10643Q3URG9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm10643Q3URG9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm10643Q3URG9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm10643Q3URG9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm10643Q3URG9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm10643Q3URG9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm10643Q3URG9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10643Q3URG9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10643Q3URG9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10643Q3URG9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10643Q3URG9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10643Q3URG9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm10643Q3URG9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms