Protein–RNA interactions for Protein: A0A0G2JDE5

Igkv1-35, Immunoglobulin kappa variable 1-35 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-35A0A0G2JDE5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Igkv1-35A0A0G2JDE5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Igkv1-35A0A0G2JDE5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Igkv1-35A0A0G2JDE5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Igkv1-35A0A0G2JDE5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Igkv1-35A0A0G2JDE5 Psd-208ENSMUST00000224556 2034 ntBASIC21.19■□□□□ 0.98
Igkv1-35A0A0G2JDE5 Gm25239-201ENSMUST00000174915 86 ntBASIC20.41■□□□□ 0.86
Igkv1-35A0A0G2JDE5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv1-35A0A0G2JDE5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv1-35A0A0G2JDE5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv1-35A0A0G2JDE5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv1-35A0A0G2JDE5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv1-35A0A0G2JDE5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Igkv1-35A0A0G2JDE5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv1-35A0A0G2JDE5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Igkv1-35A0A0G2JDE5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Igkv1-35A0A0G2JDE5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Igkv1-35A0A0G2JDE5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Igkv1-35A0A0G2JDE5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv1-35A0A0G2JDE5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv1-35A0A0G2JDE5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Igkv1-35A0A0G2JDE5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv1-35A0A0G2JDE5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.37■□□□□ 0.69
Igkv1-35A0A0G2JDE5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Igkv1-35A0A0G2JDE5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv1-35A0A0G2JDE5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv1-35A0A0G2JDE5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.28■□□□□ 0.68
Igkv1-35A0A0G2JDE5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv1-35A0A0G2JDE5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv1-35A0A0G2JDE5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv1-35A0A0G2JDE5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv1-35A0A0G2JDE5 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.24■□□□□ 0.67
Igkv1-35A0A0G2JDE5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.16■□□□□ 0.66
Igkv1-35A0A0G2JDE5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv1-35A0A0G2JDE5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv1-35A0A0G2JDE5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv1-35A0A0G2JDE5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Igkv1-35A0A0G2JDE5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv1-35A0A0G2JDE5 Gm10524-201ENSMUST00000181931 1893 ntBASIC18.84■□□□□ 0.61
Igkv1-35A0A0G2JDE5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv1-35A0A0G2JDE5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv1-35A0A0G2JDE5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Igkv1-35A0A0G2JDE5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Igkv1-35A0A0G2JDE5 Gm15042-201ENSMUST00000120212 883 ntBASIC18.73■□□□□ 0.59
Igkv1-35A0A0G2JDE5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv1-35A0A0G2JDE5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.71■□□□□ 0.59
Igkv1-35A0A0G2JDE5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Igkv1-35A0A0G2JDE5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igkv1-35A0A0G2JDE5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.62■□□□□ 0.57
Igkv1-35A0A0G2JDE5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Igkv1-35A0A0G2JDE5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv1-35A0A0G2JDE5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Igkv1-35A0A0G2JDE5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Igkv1-35A0A0G2JDE5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv1-35A0A0G2JDE5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Igkv1-35A0A0G2JDE5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv1-35A0A0G2JDE5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Igkv1-35A0A0G2JDE5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv1-35A0A0G2JDE5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv1-35A0A0G2JDE5 Gm15045-201ENSMUST00000117359 883 ntBASIC18.43■□□□□ 0.54
Igkv1-35A0A0G2JDE5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv1-35A0A0G2JDE5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv1-35A0A0G2JDE5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv1-35A0A0G2JDE5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv1-35A0A0G2JDE5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.38■□□□□ 0.53
Igkv1-35A0A0G2JDE5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv1-35A0A0G2JDE5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv1-35A0A0G2JDE5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Igkv1-35A0A0G2JDE5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Igkv1-35A0A0G2JDE5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv1-35A0A0G2JDE5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv1-35A0A0G2JDE5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.27■□□□□ 0.51
Igkv1-35A0A0G2JDE5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv1-35A0A0G2JDE5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv1-35A0A0G2JDE5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv1-35A0A0G2JDE5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Igkv1-35A0A0G2JDE5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv1-35A0A0G2JDE5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv1-35A0A0G2JDE5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.17■□□□□ 0.5
Igkv1-35A0A0G2JDE5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.17■□□□□ 0.5
Igkv1-35A0A0G2JDE5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igkv1-35A0A0G2JDE5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.13■□□□□ 0.49
Igkv1-35A0A0G2JDE5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igkv1-35A0A0G2JDE5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igkv1-35A0A0G2JDE5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv1-35A0A0G2JDE5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv1-35A0A0G2JDE5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.01■□□□□ 0.47
Igkv1-35A0A0G2JDE5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv1-35A0A0G2JDE5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv1-35A0A0G2JDE5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv1-35A0A0G2JDE5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv1-35A0A0G2JDE5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv1-35A0A0G2JDE5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv1-35A0A0G2JDE5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv1-35A0A0G2JDE5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv1-35A0A0G2JDE5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Igkv1-35A0A0G2JDE5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv1-35A0A0G2JDE5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv1-35A0A0G2JDE5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Igkv1-35A0A0G2JDE5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms