Protein–RNA interactions for Protein: O89086

Rbm3, RNA-binding protein 3, mousemouse

Known RBP Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm3O89086 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rbm3O89086 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rbm3O89086 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rbm3O89086 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rbm3O89086 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Rbm3O89086 Psd-208ENSMUST00000224556 2034 ntBASIC20.34■□□□□ 0.85
Rbm3O89086 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rbm3O89086 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rbm3O89086 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rbm3O89086 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rbm3O89086 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rbm3O89086 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rbm3O89086 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rbm3O89086 Gm25239-201ENSMUST00000174915 86 ntBASIC19.31■□□□□ 0.68
Rbm3O89086 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rbm3O89086 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbm3O89086 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbm3O89086 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rbm3O89086 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rbm3O89086 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rbm3O89086 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rbm3O89086 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rbm3O89086 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rbm3O89086 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rbm3O89086 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm3O89086 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.63■□□□□ 0.57
Rbm3O89086 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm3O89086 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm3O89086 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18.57■□□□□ 0.56
Rbm3O89086 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rbm3O89086 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.51■□□□□ 0.55
Rbm3O89086 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rbm3O89086 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rbm3O89086 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rbm3O89086 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rbm3O89086 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18.43■□□□□ 0.54
Rbm3O89086 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rbm3O89086 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rbm3O89086 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.39■□□□□ 0.53
Rbm3O89086 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rbm3O89086 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm3O89086 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rbm3O89086 Gm10524-201ENSMUST00000181931 1893 ntBASIC18.17■□□□□ 0.5
Rbm3O89086 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rbm3O89086 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rbm3O89086 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rbm3O89086 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rbm3O89086 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rbm3O89086 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rbm3O89086 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC17.99■□□□□ 0.47
Rbm3O89086 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rbm3O89086 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rbm3O89086 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rbm3O89086 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC17.86■□□□□ 0.45
Rbm3O89086 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rbm3O89086 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm3O89086 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm3O89086 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rbm3O89086 Gm15042-201ENSMUST00000120212 883 ntBASIC17.83■□□□□ 0.44
Rbm3O89086 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rbm3O89086 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rbm3O89086 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rbm3O89086 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17.73■□□□□ 0.43
Rbm3O89086 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rbm3O89086 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbm3O89086 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbm3O89086 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rbm3O89086 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rbm3O89086 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rbm3O89086 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rbm3O89086 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Rbm3O89086 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rbm3O89086 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rbm3O89086 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rbm3O89086 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rbm3O89086 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rbm3O89086 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm3O89086 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rbm3O89086 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rbm3O89086 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rbm3O89086 Gm15045-201ENSMUST00000117359 883 ntBASIC17.52■□□□□ 0.4
Rbm3O89086 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rbm3O89086 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC17.52■□□□□ 0.39
Rbm3O89086 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rbm3O89086 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rbm3O89086 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rbm3O89086 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rbm3O89086 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rbm3O89086 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rbm3O89086 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rbm3O89086 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rbm3O89086 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rbm3O89086 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rbm3O89086 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rbm3O89086 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rbm3O89086 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm3O89086 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm3O89086 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17.41■□□□□ 0.38
Rbm3O89086 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.4■□□□□ 0.38
Rbm3O89086 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms