Protein–RNA interactions for Protein: A0A0B4J1J3

Igkv8-18, Immunoglobulin kappa variable 8-18 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-18A0A0B4J1J3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Igkv8-18A0A0B4J1J3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Igkv8-18A0A0B4J1J3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Igkv8-18A0A0B4J1J3 Gm25239-201ENSMUST00000174915 86 ntBASIC21.74■■□□□ 1.07
Igkv8-18A0A0B4J1J3 Psd-208ENSMUST00000224556 2034 ntBASIC21.29■■□□□ 1
Igkv8-18A0A0B4J1J3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Igkv8-18A0A0B4J1J3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Igkv8-18A0A0B4J1J3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv8-18A0A0B4J1J3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Igkv8-18A0A0B4J1J3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv8-18A0A0B4J1J3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Igkv8-18A0A0B4J1J3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv8-18A0A0B4J1J3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv8-18A0A0B4J1J3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv8-18A0A0B4J1J3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Igkv8-18A0A0B4J1J3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Igkv8-18A0A0B4J1J3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.96■□□□□ 0.79
Igkv8-18A0A0B4J1J3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
Igkv8-18A0A0B4J1J3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv8-18A0A0B4J1J3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Igkv8-18A0A0B4J1J3 Gm15042-201ENSMUST00000120212 883 ntBASIC19.77■□□□□ 0.76
Igkv8-18A0A0B4J1J3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Igkv8-18A0A0B4J1J3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Igkv8-18A0A0B4J1J3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Igkv8-18A0A0B4J1J3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv8-18A0A0B4J1J3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv8-18A0A0B4J1J3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv8-18A0A0B4J1J3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv8-18A0A0B4J1J3 Gm15045-201ENSMUST00000117359 883 ntBASIC19.42■□□□□ 0.7
Igkv8-18A0A0B4J1J3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.4■□□□□ 0.7
Igkv8-18A0A0B4J1J3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv8-18A0A0B4J1J3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.3■□□□□ 0.68
Igkv8-18A0A0B4J1J3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.3■□□□□ 0.68
Igkv8-18A0A0B4J1J3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv8-18A0A0B4J1J3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv8-18A0A0B4J1J3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv8-18A0A0B4J1J3 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.22■□□□□ 0.67
Igkv8-18A0A0B4J1J3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv8-18A0A0B4J1J3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv8-18A0A0B4J1J3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv8-18A0A0B4J1J3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.14■□□□□ 0.66
Igkv8-18A0A0B4J1J3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Igkv8-18A0A0B4J1J3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv8-18A0A0B4J1J3 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.13■□□□□ 0.65
Igkv8-18A0A0B4J1J3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv8-18A0A0B4J1J3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.99■□□□□ 0.63
Igkv8-18A0A0B4J1J3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Igkv8-18A0A0B4J1J3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igkv8-18A0A0B4J1J3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Igkv8-18A0A0B4J1J3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igkv8-18A0A0B4J1J3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Igkv8-18A0A0B4J1J3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv8-18A0A0B4J1J3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv8-18A0A0B4J1J3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Igkv8-18A0A0B4J1J3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv8-18A0A0B4J1J3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Igkv8-18A0A0B4J1J3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv8-18A0A0B4J1J3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv8-18A0A0B4J1J3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igkv8-18A0A0B4J1J3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Igkv8-18A0A0B4J1J3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv8-18A0A0B4J1J3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv8-18A0A0B4J1J3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv8-18A0A0B4J1J3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv8-18A0A0B4J1J3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Igkv8-18A0A0B4J1J3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.56■□□□□ 0.56
Igkv8-18A0A0B4J1J3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Igkv8-18A0A0B4J1J3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv8-18A0A0B4J1J3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv8-18A0A0B4J1J3 Gm24109-201ENSMUST00000175489 103 ntBASIC18.47■□□□□ 0.55
Igkv8-18A0A0B4J1J3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Igkv8-18A0A0B4J1J3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv8-18A0A0B4J1J3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv8-18A0A0B4J1J3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv8-18A0A0B4J1J3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv8-18A0A0B4J1J3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Igkv8-18A0A0B4J1J3 Gm23366-201ENSMUST00000175022 89 ntBASIC18.3■□□□□ 0.52
Igkv8-18A0A0B4J1J3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv8-18A0A0B4J1J3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv8-18A0A0B4J1J3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv8-18A0A0B4J1J3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv8-18A0A0B4J1J3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv8-18A0A0B4J1J3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv8-18A0A0B4J1J3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv8-18A0A0B4J1J3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Igkv8-18A0A0B4J1J3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Igkv8-18A0A0B4J1J3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Igkv8-18A0A0B4J1J3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18.16■□□□□ 0.5
Igkv8-18A0A0B4J1J3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.16■□□□□ 0.5
Igkv8-18A0A0B4J1J3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv8-18A0A0B4J1J3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv8-18A0A0B4J1J3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv8-18A0A0B4J1J3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv8-18A0A0B4J1J3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Igkv8-18A0A0B4J1J3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Igkv8-18A0A0B4J1J3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv8-18A0A0B4J1J3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Igkv8-18A0A0B4J1J3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv8-18A0A0B4J1J3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Igkv8-18A0A0B4J1J3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms