Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Xcl1P47993 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Xcl1P47993 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Xcl1P47993 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Xcl1P47993 Psd-208ENSMUST00000224556 2034 ntBASIC20.97■□□□□ 0.95
Xcl1P47993 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Xcl1P47993 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Xcl1P47993 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Xcl1P47993 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Xcl1P47993 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Xcl1P47993 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Xcl1P47993 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Xcl1P47993 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Xcl1P47993 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Xcl1P47993 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Xcl1P47993 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Xcl1P47993 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Xcl1P47993 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Xcl1P47993 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Xcl1P47993 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Xcl1P47993 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Xcl1P47993 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Xcl1P47993 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Xcl1P47993 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Xcl1P47993 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Xcl1P47993 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Xcl1P47993 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.34■□□□□ 0.69
Xcl1P47993 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Xcl1P47993 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Xcl1P47993 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.1■□□□□ 0.65
Xcl1P47993 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.04■□□□□ 0.64
Xcl1P47993 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Xcl1P47993 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Xcl1P47993 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Xcl1P47993 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18.87■□□□□ 0.61
Xcl1P47993 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xcl1P47993 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xcl1P47993 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xcl1P47993 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Xcl1P47993 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xcl1P47993 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Xcl1P47993 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Xcl1P47993 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Xcl1P47993 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Xcl1P47993 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Xcl1P47993 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Xcl1P47993 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18.58■□□□□ 0.57
Xcl1P47993 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Xcl1P47993 Gm10524-201ENSMUST00000181931 1893 ntBASIC18.5■□□□□ 0.55
Xcl1P47993 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Xcl1P47993 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Xcl1P47993 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Xcl1P47993 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Xcl1P47993 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Xcl1P47993 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Xcl1P47993 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Xcl1P47993 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Xcl1P47993 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Xcl1P47993 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Xcl1P47993 Gm25239-201ENSMUST00000174915 86 ntBASIC18.35■□□□□ 0.53
Xcl1P47993 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Xcl1P47993 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Xcl1P47993 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Xcl1P47993 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Xcl1P47993 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Xcl1P47993 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Xcl1P47993 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xcl1P47993 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.26■□□□□ 0.51
Xcl1P47993 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xcl1P47993 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.25■□□□□ 0.51
Xcl1P47993 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.24■□□□□ 0.51
Xcl1P47993 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Xcl1P47993 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Xcl1P47993 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Xcl1P47993 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xcl1P47993 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Xcl1P47993 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Xcl1P47993 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Xcl1P47993 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Xcl1P47993 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Xcl1P47993 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Xcl1P47993 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Xcl1P47993 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.04■□□□□ 0.48
Xcl1P47993 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Xcl1P47993 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Xcl1P47993 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Xcl1P47993 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Xcl1P47993 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xcl1P47993 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Xcl1P47993 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Xcl1P47993 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Xcl1P47993 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Xcl1P47993 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xcl1P47993 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Xcl1P47993 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xcl1P47993 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Xcl1P47993 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Xcl1P47993 Zxda-201ENSMUST00000117281 2621 ntBASIC17.81■□□□□ 0.44
Xcl1P47993 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC17.8■□□□□ 0.44
Xcl1P47993 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms