Protein–RNA interactions for Protein: A0A140T8M9

Igkv1-122, Immunoglobulin kappa chain variable 1-122 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-122A0A140T8M9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv1-122A0A140T8M9 Gm25239-201ENSMUST00000174915 86 ntBASIC21.27■■□□□ 1
Igkv1-122A0A140T8M9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Igkv1-122A0A140T8M9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv1-122A0A140T8M9 Psd-208ENSMUST00000224556 2034 ntBASIC20.31■□□□□ 0.84
Igkv1-122A0A140T8M9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv1-122A0A140T8M9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Igkv1-122A0A140T8M9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Igkv1-122A0A140T8M9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Igkv1-122A0A140T8M9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Igkv1-122A0A140T8M9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Igkv1-122A0A140T8M9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Igkv1-122A0A140T8M9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv1-122A0A140T8M9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv1-122A0A140T8M9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Igkv1-122A0A140T8M9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv1-122A0A140T8M9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv1-122A0A140T8M9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv1-122A0A140T8M9 Gm15042-201ENSMUST00000120212 883 ntBASIC19.22■□□□□ 0.67
Igkv1-122A0A140T8M9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.2■□□□□ 0.66
Igkv1-122A0A140T8M9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv1-122A0A140T8M9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igkv1-122A0A140T8M9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv1-122A0A140T8M9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Igkv1-122A0A140T8M9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Igkv1-122A0A140T8M9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Igkv1-122A0A140T8M9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv1-122A0A140T8M9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Igkv1-122A0A140T8M9 Gm15045-201ENSMUST00000117359 883 ntBASIC18.84■□□□□ 0.61
Igkv1-122A0A140T8M9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv1-122A0A140T8M9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv1-122A0A140T8M9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Igkv1-122A0A140T8M9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv1-122A0A140T8M9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igkv1-122A0A140T8M9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv1-122A0A140T8M9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Igkv1-122A0A140T8M9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Igkv1-122A0A140T8M9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Igkv1-122A0A140T8M9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.53■□□□□ 0.56
Igkv1-122A0A140T8M9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.53■□□□□ 0.56
Igkv1-122A0A140T8M9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18.52■□□□□ 0.56
Igkv1-122A0A140T8M9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv1-122A0A140T8M9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv1-122A0A140T8M9 Gm10524-201ENSMUST00000181931 1893 ntBASIC18.38■□□□□ 0.53
Igkv1-122A0A140T8M9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.37■□□□□ 0.53
Igkv1-122A0A140T8M9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv1-122A0A140T8M9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv1-122A0A140T8M9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv1-122A0A140T8M9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv1-122A0A140T8M9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.23■□□□□ 0.51
Igkv1-122A0A140T8M9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.21■□□□□ 0.51
Igkv1-122A0A140T8M9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv1-122A0A140T8M9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Igkv1-122A0A140T8M9 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.17■□□□□ 0.5
Igkv1-122A0A140T8M9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igkv1-122A0A140T8M9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv1-122A0A140T8M9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Igkv1-122A0A140T8M9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv1-122A0A140T8M9 Gm24109-201ENSMUST00000175489 103 ntBASIC18.09■□□□□ 0.49
Igkv1-122A0A140T8M9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igkv1-122A0A140T8M9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv1-122A0A140T8M9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Igkv1-122A0A140T8M9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv1-122A0A140T8M9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv1-122A0A140T8M9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv1-122A0A140T8M9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv1-122A0A140T8M9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv1-122A0A140T8M9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv1-122A0A140T8M9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Igkv1-122A0A140T8M9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv1-122A0A140T8M9 Gm23366-201ENSMUST00000175022 89 ntBASIC17.88■□□□□ 0.45
Igkv1-122A0A140T8M9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv1-122A0A140T8M9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17.84■□□□□ 0.45
Igkv1-122A0A140T8M9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Igkv1-122A0A140T8M9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Igkv1-122A0A140T8M9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv1-122A0A140T8M9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Igkv1-122A0A140T8M9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv1-122A0A140T8M9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Igkv1-122A0A140T8M9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv1-122A0A140T8M9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Igkv1-122A0A140T8M9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv1-122A0A140T8M9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv1-122A0A140T8M9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv1-122A0A140T8M9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv1-122A0A140T8M9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv1-122A0A140T8M9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv1-122A0A140T8M9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC17.71■□□□□ 0.43
Igkv1-122A0A140T8M9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv1-122A0A140T8M9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Igkv1-122A0A140T8M9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Igkv1-122A0A140T8M9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv1-122A0A140T8M9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv1-122A0A140T8M9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Igkv1-122A0A140T8M9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv1-122A0A140T8M9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv1-122A0A140T8M9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv1-122A0A140T8M9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv1-122A0A140T8M9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Igkv1-122A0A140T8M9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms