Protein–RNA interactions for Protein: A0A087WSL9

Gm28539, Predicted gene 28539, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28539A0A087WSL9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm28539A0A087WSL9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gm28539A0A087WSL9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm28539A0A087WSL9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Gm28539A0A087WSL9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28539A0A087WSL9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm28539A0A087WSL9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Gm28539A0A087WSL9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28539A0A087WSL9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm28539A0A087WSL9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm28539A0A087WSL9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm28539A0A087WSL9 Psd-208ENSMUST00000224556 2034 ntBASIC19.9■□□□□ 0.78
Gm28539A0A087WSL9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28539A0A087WSL9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28539A0A087WSL9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm28539A0A087WSL9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Gm28539A0A087WSL9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm28539A0A087WSL9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm28539A0A087WSL9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28539A0A087WSL9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Gm28539A0A087WSL9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.39■□□□□ 0.69
Gm28539A0A087WSL9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Gm28539A0A087WSL9 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.21■□□□□ 0.67
Gm28539A0A087WSL9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm28539A0A087WSL9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm28539A0A087WSL9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm28539A0A087WSL9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm28539A0A087WSL9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28539A0A087WSL9 Zxda-201ENSMUST00000117281 2621 ntBASIC18.91■□□□□ 0.62
Gm28539A0A087WSL9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Gm28539A0A087WSL9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm28539A0A087WSL9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28539A0A087WSL9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28539A0A087WSL9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28539A0A087WSL9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.74■□□□□ 0.59
Gm28539A0A087WSL9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Gm28539A0A087WSL9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28539A0A087WSL9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28539A0A087WSL9 Gm25239-201ENSMUST00000174915 86 ntBASIC18.64■□□□□ 0.57
Gm28539A0A087WSL9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.61■□□□□ 0.57
Gm28539A0A087WSL9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28539A0A087WSL9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28539A0A087WSL9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm28539A0A087WSL9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28539A0A087WSL9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm28539A0A087WSL9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28539A0A087WSL9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28539A0A087WSL9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Gm28539A0A087WSL9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28539A0A087WSL9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28539A0A087WSL9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Gm28539A0A087WSL9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28539A0A087WSL9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm28539A0A087WSL9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28539A0A087WSL9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28539A0A087WSL9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm28539A0A087WSL9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28539A0A087WSL9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm28539A0A087WSL9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.06■□□□□ 0.48
Gm28539A0A087WSL9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm28539A0A087WSL9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Gm28539A0A087WSL9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28539A0A087WSL9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Gm28539A0A087WSL9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28539A0A087WSL9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28539A0A087WSL9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28539A0A087WSL9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28539A0A087WSL9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28539A0A087WSL9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Gm28539A0A087WSL9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28539A0A087WSL9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28539A0A087WSL9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28539A0A087WSL9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28539A0A087WSL9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC17.88■□□□□ 0.45
Gm28539A0A087WSL9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28539A0A087WSL9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28539A0A087WSL9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm28539A0A087WSL9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm28539A0A087WSL9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28539A0A087WSL9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28539A0A087WSL9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Gm28539A0A087WSL9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm28539A0A087WSL9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28539A0A087WSL9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm28539A0A087WSL9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28539A0A087WSL9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm28539A0A087WSL9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28539A0A087WSL9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28539A0A087WSL9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm28539A0A087WSL9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28539A0A087WSL9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gm28539A0A087WSL9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28539A0A087WSL9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28539A0A087WSL9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28539A0A087WSL9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28539A0A087WSL9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28539A0A087WSL9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28539A0A087WSL9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Gm28539A0A087WSL9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28539A0A087WSL9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms