Protein–RNA interactions for Protein: D3Z167

Gm16253, Predicted gene 16253, mousemouse

Predictions only

Length 63 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm16253D3Z167 Gm25239-201ENSMUST00000174915 86 ntBASIC20.53■□□□□ 0.88
Gm16253D3Z167 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm16253D3Z167 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm16253D3Z167 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Gm16253D3Z167 Psd-208ENSMUST00000224556 2034 ntBASIC18.88■□□□□ 0.61
Gm16253D3Z167 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm16253D3Z167 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm16253D3Z167 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm16253D3Z167 Gm15042-201ENSMUST00000120212 883 ntBASIC18.46■□□□□ 0.55
Gm16253D3Z167 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm16253D3Z167 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm16253D3Z167 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm16253D3Z167 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm16253D3Z167 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18.16■□□□□ 0.5
Gm16253D3Z167 Gm15045-201ENSMUST00000117359 883 ntBASIC18.13■□□□□ 0.49
Gm16253D3Z167 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm16253D3Z167 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm16253D3Z167 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm16253D3Z167 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm16253D3Z167 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm16253D3Z167 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm16253D3Z167 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm16253D3Z167 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm16253D3Z167 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC17.65■□□□□ 0.42
Gm16253D3Z167 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm16253D3Z167 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm16253D3Z167 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm16253D3Z167 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm16253D3Z167 Gm24109-201ENSMUST00000175489 103 ntBASIC17.57■□□□□ 0.4
Gm16253D3Z167 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC17.54■□□□□ 0.4
Gm16253D3Z167 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm16253D3Z167 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm16253D3Z167 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm16253D3Z167 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm16253D3Z167 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm16253D3Z167 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm16253D3Z167 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm16253D3Z167 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm16253D3Z167 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Gm16253D3Z167 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17.27■□□□□ 0.35
Gm16253D3Z167 Gm23366-201ENSMUST00000175022 89 ntBASIC17.25■□□□□ 0.35
Gm16253D3Z167 Gm10524-201ENSMUST00000181931 1893 ntBASIC17.24■□□□□ 0.35
Gm16253D3Z167 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm16253D3Z167 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm16253D3Z167 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm16253D3Z167 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm16253D3Z167 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm16253D3Z167 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm16253D3Z167 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gm16253D3Z167 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Gm16253D3Z167 AC153911.1-202ENSMUST00000218534 1034 ntBASIC16.91■□□□□ 0.3
Gm16253D3Z167 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Gm16253D3Z167 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC16.82■□□□□ 0.28
Gm16253D3Z167 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm16253D3Z167 CT025624.2-201ENSMUST00000223609 1909 ntBASIC16.76■□□□□ 0.27
Gm16253D3Z167 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm16253D3Z167 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm16253D3Z167 Gm42596-201ENSMUST00000196305 1958 ntBASIC16.74■□□□□ 0.27
Gm16253D3Z167 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm16253D3Z167 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Gm16253D3Z167 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm16253D3Z167 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm16253D3Z167 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm16253D3Z167 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm16253D3Z167 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm16253D3Z167 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Gm16253D3Z167 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm16253D3Z167 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm16253D3Z167 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm16253D3Z167 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm16253D3Z167 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Gm16253D3Z167 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Gm16253D3Z167 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm16253D3Z167 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm16253D3Z167 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm16253D3Z167 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm16253D3Z167 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC16.37■□□□□ 0.21
Gm16253D3Z167 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm16253D3Z167 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm16253D3Z167 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm16253D3Z167 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm16253D3Z167 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm16253D3Z167 Gm27325-201ENSMUST00000175467 74 ntBASIC16.27■□□□□ 0.2
Gm16253D3Z167 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm16253D3Z167 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm16253D3Z167 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gm16253D3Z167 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm16253D3Z167 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm16253D3Z167 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm16253D3Z167 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Gm16253D3Z167 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm16253D3Z167 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm16253D3Z167 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm16253D3Z167 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC16.17■□□□□ 0.18
Gm16253D3Z167 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm16253D3Z167 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm16253D3Z167 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm16253D3Z167 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC16.08■□□□□ 0.17
Gm16253D3Z167 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm16253D3Z167 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms