RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Chic1Q8CBW7 227 aa35.07■■■■□ 3.2
Hmgb1-202ENSMUST00000093196 Mapk8ip2Q9ERE9 830 aa32.83■■■□□ 2.85
Hmgb1-202ENSMUST00000093196 Phf23Q8BSN5 401 aa31.69■■■□□ 2.66
Hmgb1-202ENSMUST00000093196 Plppr3Q7TPB0 716 aa31.54■■■□□ 2.64
Hmgb1-202ENSMUST00000093196 Gab3Q8BSM5 595 aa30.7■■■□□ 2.51
Hmgb1-202ENSMUST00000093196 Kcna4Q61423 654 aa29.68■■■□□ 2.34
Hmgb1-202ENSMUST00000093196 Senp3Q9EP97 568 aaKnown RBP29.53■■■□□ 2.32
Hmgb1-202ENSMUST00000093196 Abcc9P70170 1546 aa28.23■■■□□ 2.11
Hmgb1-202ENSMUST00000093196 Gm35339A0A140LHH9 1649 aa28.14■■■□□ 2.1
Hmgb1-202ENSMUST00000093196 Dnajc5bQ9CQ94 199 aa27.53■■■□□ 2
Hmgb1-202ENSMUST00000093196 Ppargc1bQ8VHJ7 1014 aa27.1■■□□□ 1.93
Hmgb1-202ENSMUST00000093196 NischQ80TM9 1593 aa26.96■■□□□ 1.91
Hmgb1-202ENSMUST00000093196 ScribQ80U72 1612 aa26.9■■□□□ 1.9
Hmgb1-202ENSMUST00000093196 Dnajc5P60904 198 aa26.63■■□□□ 1.85
Hmgb1-202ENSMUST00000093196 Dmrt2Q8BG36 561 aa26.63■■□□□ 1.85
Hmgb1-202ENSMUST00000093196 Abcc8B2RUS7 1588 aa26.62■■□□□ 1.85
Hmgb1-202ENSMUST00000093196 Ube2uB1AUC4 352 aa26.61■■□□□ 1.85
Hmgb1-202ENSMUST00000093196 Slc4a1apE9PX68 744 aa26.11■■□□□ 1.77
Hmgb1-202ENSMUST00000093196 Trap1aP19473 224 aa26.05■■□□□ 1.76
Hmgb1-202ENSMUST00000093196 NacadQ5SWP3 1504 aa25.62■■□□□ 1.69
Hmgb1-202ENSMUST00000093196 Hoxd11P23813 323 aa25.61■■□□□ 1.69
Hmgb1-202ENSMUST00000093196 Kdm5dQ62240 1548 aa25.48■■□□□ 1.67
Hmgb1-202ENSMUST00000093196 Thoc2B1AZI6 1594 aaKnown RBP25.46■■□□□ 1.67
Hmgb1-202ENSMUST00000093196 BicraF8VPZ9 1578 aa25.34■■□□□ 1.65
Hmgb1-202ENSMUST00000093196 Trim41Q5NCC3 630 aa25.32■■□□□ 1.64
Hmgb1-202ENSMUST00000093196 Sycp2Q9CUU3 1500 aa25.26■■□□□ 1.63
Hmgb1-202ENSMUST00000093196 Fam71e1A1L3C1 212 aa25.02■■□□□ 1.6
Hmgb1-202ENSMUST00000093196 Cc2d2aQ8CFW7 1633 aa24.96■■□□□ 1.59
Hmgb1-202ENSMUST00000093196 Atf5O70191 283 aa24.81■■□□□ 1.56
Hmgb1-202ENSMUST00000093196 Pds5bQ4VA53 1446 aaKnown RBP24.8■■□□□ 1.56
Hmgb1-202ENSMUST00000093196 Ppp4r2Q0VGB7 417 aa24.6■■□□□ 1.53
Hmgb1-202ENSMUST00000093196 Hs6st3Q9QYK4 470 aa24.53■■□□□ 1.52
Hmgb1-202ENSMUST00000093196 Chrna2Q91X60 512 aa24.5■■□□□ 1.51
Hmgb1-202ENSMUST00000093196 1700123L14RikQ3V2K7 440 aa24.44■■□□□ 1.5
Hmgb1-202ENSMUST00000093196 Fam135aQ6NS59 1506 aa24.43■■□□□ 1.5
Hmgb1-202ENSMUST00000093196 Znf219Q6IQX8 726 aa24.35■■□□□ 1.49
Hmgb1-202ENSMUST00000093196 Atad2bE9Q166 1460 aaKnown RBP24.23■■□□□ 1.47
Hmgb1-202ENSMUST00000093196 Ercc6F8VPZ5 1481 aa24.23■■□□□ 1.47
Hmgb1-202ENSMUST00000093196 Rsph4aQ8BYM7 716 aa24.2■■□□□ 1.46
Hmgb1-202ENSMUST00000093196 Nlrp6Q91WS2 869 aa24.18■■□□□ 1.46
Hmgb1-202ENSMUST00000093196 Ehmt2Q9Z148 1263 aaKnown RBP24.17■■□□□ 1.46
Hmgb1-202ENSMUST00000093196 Dcaf1Q80TR8 1506 aa24.13■■□□□ 1.45
Hmgb1-202ENSMUST00000093196 AcrbpQ3V140 540 aa24.11■■□□□ 1.45
Hmgb1-202ENSMUST00000093196 Col17a1Q07563 1470 aa24.05■■□□□ 1.44
Hmgb1-202ENSMUST00000093196 Pde4cQ3UEI1 686 aa24.01■■□□□ 1.43
Hmgb1-202ENSMUST00000093196 Cdca7Q9D0M2 382 aa23.93■■□□□ 1.42
Hmgb1-202ENSMUST00000093196 Shroom2A2ALU4 1481 aa23.92■■□□□ 1.42
Hmgb1-202ENSMUST00000093196 Baz1bQ9Z277 1479 aa23.9■■□□□ 1.42
Hmgb1-202ENSMUST00000093196 Mrc2Q64449 1479 aa23.84■■□□□ 1.41
Hmgb1-202ENSMUST00000093196 Rimbp2Q80U40 1072 aa23.84■■□□□ 1.41
Hmgb1-202ENSMUST00000093196 Fam163aQ8CAA5 168 aa23.8■■□□□ 1.4
Hmgb1-202ENSMUST00000093196 Phldb1Q6PDH0 1371 aaKnown RBP23.79■■□□□ 1.4
Hmgb1-202ENSMUST00000093196 Smarca2Q6DIC0 1577 aa23.77■■□□□ 1.4
Hmgb1-202ENSMUST00000093196 Pcdh10E9PXQ7 1057 aa23.75■■□□□ 1.39
Hmgb1-202ENSMUST00000093196 Cypt1Q8CH20 168 aa23.74■■□□□ 1.39
Hmgb1-202ENSMUST00000093196 Rtn4Q99P72 1162 aaKnown RBP23.71■■□□□ 1.39
Hmgb1-202ENSMUST00000093196 Ubl4bQ9CQ84 188 aa23.7■■□□□ 1.38
Hmgb1-202ENSMUST00000093196 Wdr62Q3U3T8 1523 aa23.59■■□□□ 1.37
Hmgb1-202ENSMUST00000093196 Frmpd1A2AKB4 1549 aa23.59■■□□□ 1.37
Hmgb1-202ENSMUST00000093196 Rb1cc1Q9ESK9 1588 aa23.57■■□□□ 1.36
Hmgb1-202ENSMUST00000093196 Lrriq1Q0P5X1 1673 aa23.54■■□□□ 1.36
Hmgb1-202ENSMUST00000093196 Iqgap2Q3UQ44 1575 aa23.51■■□□□ 1.35
Hmgb1-202ENSMUST00000093196 Rsf1E9PWW9 1441 aaKnown RBP23.45■■□□□ 1.34
Hmgb1-202ENSMUST00000093196 Prm3Q62100 101 aa23.41■■□□□ 1.34
Hmgb1-202ENSMUST00000093196 Tshz2Q68FE9 1030 aa23.39■■□□□ 1.33
Hmgb1-202ENSMUST00000093196 Smarca4Q3TKT4 1613 aaKnown RBP23.32■■□□□ 1.32
Hmgb1-202ENSMUST00000093196 Unc13aQ4KUS2 1712 aa23.3■■□□□ 1.32
Hmgb1-202ENSMUST00000093196 Top2bQ64511 1612 aa23.3■■□□□ 1.32
Hmgb1-202ENSMUST00000093196 Pabpn1Q8CCS6 302 aaKnown RBP23.28■■□□□ 1.32
Hmgb1-202ENSMUST00000093196 Arhgef5E9Q7D5 1581 aa23.18■■□□□ 1.3
Hmgb1-202ENSMUST00000093196 Bach1P97302 739 aa23.18■■□□□ 1.3
Hmgb1-202ENSMUST00000093196 Zcchc11B2RX14 1644 aaKnown RBP23.16■■□□□ 1.3
Hmgb1-202ENSMUST00000093196 C1qtnf12Q8R2Z0 308 aa23.15■■□□□ 1.3
Hmgb1-202ENSMUST00000093196 Npm2Q80W85 207 aa23.13■■□□□ 1.29
Hmgb1-202ENSMUST00000093196 Eif4g3Q80XI3 1579 aaKnown RBP23.12■■□□□ 1.29
Hmgb1-202ENSMUST00000093196 Cecr2E9Q2Z1 1453 aa23.03■■□□□ 1.28
Hmgb1-202ENSMUST00000093196 Riok3Q9DBU3 519 aaKnown RBP23■■□□□ 1.27
Hmgb1-202ENSMUST00000093196 Akt1s1Q9D1F4 257 aa22.96■■□□□ 1.27
Hmgb1-202ENSMUST00000093196 MyclP10166 368 aa22.95■■□□□ 1.26
Hmgb1-202ENSMUST00000093196 Pelp1Q9DBD5 1123 aaKnown RBP22.95■■□□□ 1.26
Hmgb1-202ENSMUST00000093196 Crybg2B7ZCC2 1516 aa22.93■■□□□ 1.26
Hmgb1-202ENSMUST00000093196 Baz1aO88379 1555 aa22.93■■□□□ 1.26
Hmgb1-202ENSMUST00000093196 Slc34a2Q9DBP0 697 aa22.92■■□□□ 1.26
Hmgb1-202ENSMUST00000093196 Ecm2Q5FW85 670 aa22.87■■□□□ 1.25
Hmgb1-202ENSMUST00000093196 Styxl1Q9DAR2 321 aa22.86■■□□□ 1.25
Hmgb1-202ENSMUST00000093196 Zcchc6Q5BLK4 1491 aaKnown RBP22.85■■□□□ 1.25
Hmgb1-202ENSMUST00000093196 ArsiQ32KI9 573 aa22.85■■□□□ 1.25
Hmgb1-202ENSMUST00000093196 Kif21aQ9QXL2 1672 aa22.83■■□□□ 1.24
Hmgb1-202ENSMUST00000093196 Prdm10Q3UTQ7 1184 aa22.8■■□□□ 1.24
Hmgb1-202ENSMUST00000093196 WdpcpQ8C456 722 aa22.79■■□□□ 1.24
Hmgb1-202ENSMUST00000093196 Plekhg3Q4VAC9 1341 aa22.79■■□□□ 1.24
Hmgb1-202ENSMUST00000093196 Ttbk1Q6PCN3 1308 aa22.74■■□□□ 1.23
Hmgb1-202ENSMUST00000093196 Sox12Q04890 314 aa22.73■■□□□ 1.23
Hmgb1-202ENSMUST00000093196 Adgrl3Q80TS3 1537 aa22.61■■□□□ 1.21
Hmgb1-202ENSMUST00000093196 Plb1Q3TTY0 1478 aa22.5■■□□□ 1.19
Hmgb1-202ENSMUST00000093196 PtprtQ99M80 1454 aa22.49■■□□□ 1.19
Hmgb1-202ENSMUST00000093196 Cux2P70298 1426 aa22.48■■□□□ 1.19
Hmgb1-202ENSMUST00000093196 Ccdc180J3QNE4 1664 aa22.48■■□□□ 1.19
Hmgb1-202ENSMUST00000093196 Urb2E9Q7L1 1524 aaKnown RBP22.36■■□□□ 1.17
Hmgb1-202ENSMUST00000093196 Fbxo41Q6NS60 873 aa22.34■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms