RNA–Protein interactions for RNA: ENSMUST00000072753.12

Ssbp3-202, Transcript of Single-stranded DNA-binding protein 3, mousemouse

TSL 1 (best) BASIC

Gene Ssbp3, Length 1,924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3-202ENSMUST00000072753 Prr13Q9CQJ5 137 aa14.59□□□□□ -0.07
Ssbp3-202ENSMUST00000072753 Krtap19-5O08632 62 aa14.58□□□□□ -0.08
Ssbp3-202ENSMUST00000072753 Spaca4Q80ZQ0 127 aa14.58□□□□□ -0.08
Ssbp3-202ENSMUST00000072753 Herc2Q4U2R1 4836 aa14.55□□□□□ -0.08
Ssbp3-202ENSMUST00000072753 Apoc4Q61268 124 aa14.54□□□□□ -0.08
Ssbp3-202ENSMUST00000072753 Gm2310J3QNJ2 377 aa14.53□□□□□ -0.08
Ssbp3-202ENSMUST00000072753 Spink8Q09TK9 105 aa14.53□□□□□ -0.08
Ssbp3-202ENSMUST00000072753 Defa21Q8C1P2 93 aa14.51□□□□□ -0.09
Ssbp3-202ENSMUST00000072753 Birc6O88738 4882 aa14.51□□□□□ -0.09
Ssbp3-202ENSMUST00000072753 Abca13Q5SSE9 5034 aa14.5□□□□□ -0.09
Ssbp3-202ENSMUST00000072753 Dph3Q8K0W9 82 aa14.49□□□□□ -0.09
Ssbp3-202ENSMUST00000072753 Fat3Q8BNA6 4555 aa14.48□□□□□ -0.09
Ssbp3-202ENSMUST00000072753 Lrp1Q91ZX7 4545 aaKnown RBP14.48□□□□□ -0.09
Ssbp3-202ENSMUST00000072753 Samd13D3YUG0 102 aa14.47□□□□□ -0.09
Ssbp3-202ENSMUST00000072753 A0A286YE49 62 aa14.43□□□□□ -0.1
Ssbp3-202ENSMUST00000072753 Defb12Q8K4N3 78 aa14.43□□□□□ -0.1
Ssbp3-202ENSMUST00000072753 GhrhP16043 103 aa14.41□□□□□ -0.1
Ssbp3-202ENSMUST00000072753 Kiaa1109A2AAE1 5005 aa14.4□□□□□ -0.1
Ssbp3-202ENSMUST00000072753 Igkv3-3A0A140T8Q0 119 aa14.38□□□□□ -0.11
Ssbp3-202ENSMUST00000072753 B230307C23RikQ8BLB2 64 aa14.38□□□□□ -0.11
Ssbp3-202ENSMUST00000072753 BikO70337 150 aa14.34□□□□□ -0.11
Ssbp3-202ENSMUST00000072753 Dnhd1D3Z2X2 4750 aa14.32□□□□□ -0.12
Ssbp3-202ENSMUST00000072753 Cypt15B1AXS0 87 aa14.31□□□□□ -0.12
Ssbp3-202ENSMUST00000072753 1700074P13RikQ9D9G7 251 aa14.23□□□□□ -0.13
Ssbp3-202ENSMUST00000072753 Pcp4P63054 62 aa14.19□□□□□ -0.14
Ssbp3-202ENSMUST00000072753 Gm28539A0A087WSL9 92 aa14.18□□□□□ -0.14
Ssbp3-202ENSMUST00000072753 Rps29P62274 56 aa14.16□□□□□ -0.14
Ssbp3-202ENSMUST00000072753 HydinQ80W93 5154 aa14.15□□□□□ -0.14
Ssbp3-202ENSMUST00000072753 D6Ertd527eA0A0N4SWI3 464 aa14.12□□□□□ -0.15
Ssbp3-202ENSMUST00000072753 Gm10267M0QWD8 85 aa14.11□□□□□ -0.15
Ssbp3-202ENSMUST00000072753 Coa6Q8BGD8 79 aa14.1□□□□□ -0.15
Ssbp3-202ENSMUST00000072753 Defb13Q8R2I4 64 aa14.09□□□□□ -0.15
Ssbp3-202ENSMUST00000072753 Scgb1b2O35176 93 aa14.08□□□□□ -0.16
Ssbp3-202ENSMUST00000072753 SmcpP15265 143 aa14.08□□□□□ -0.16
Ssbp3-202ENSMUST00000072753 Atox1O08997 68 aaKnown RBP14.07□□□□□ -0.16
Ssbp3-202ENSMUST00000072753 Spint4Q9D263 159 aa14.06□□□□□ -0.16
Ssbp3-202ENSMUST00000072753 A530084C06RikQ3UTW2 186 aa14.05□□□□□ -0.16
Ssbp3-202ENSMUST00000072753 Tmem258P61166 79 aa14.03□□□□□ -0.16
Ssbp3-202ENSMUST00000072753 Mycbp2Q7TPH6 4711 aa14.01□□□□□ -0.17
Ssbp3-202ENSMUST00000072753 PcloQ9QYX7 5068 aa14.01□□□□□ -0.17
Ssbp3-202ENSMUST00000072753 Gm9736A0A1W2P7N1 277 aa13.98□□□□□ -0.17
Ssbp3-202ENSMUST00000072753 Gm19935A0A1B0GSF9 52 aa13.93□□□□□ -0.18
Ssbp3-202ENSMUST00000072753 Gm11939A2A592 99 aa13.89□□□□□ -0.19
Ssbp3-202ENSMUST00000072753 Smlr1J3QMJ4 66 aa13.89□□□□□ -0.19
Ssbp3-202ENSMUST00000072753 Chtf8P0CG14 533 aa13.88□□□□□ -0.19
Ssbp3-202ENSMUST00000072753 Gm26620Q9CY65 116 aa13.88□□□□□ -0.19
Ssbp3-202ENSMUST00000072753 Smim20D3Z7Q2 69 aa13.88□□□□□ -0.19
Ssbp3-202ENSMUST00000072753 Lce1mQ9CR91 182 aa13.87□□□□□ -0.19
Ssbp3-202ENSMUST00000072753 SnurfQ9WU12 71 aa13.86□□□□□ -0.19
Ssbp3-202ENSMUST00000072753 Pet100P0DJE0 76 aa13.79□□□□□ -0.2
Ssbp3-202ENSMUST00000072753 Coa5Q99M07 74 aa13.78□□□□□ -0.2
Ssbp3-202ENSMUST00000072753 Defb38Q7TNV7 63 aa13.76□□□□□ -0.21
Ssbp3-202ENSMUST00000072753 Gm10160F6Y577 67 aa13.73□□□□□ -0.21
Ssbp3-202ENSMUST00000072753 Lrp2A2ARV4 4660 aa13.71□□□□□ -0.21
Ssbp3-202ENSMUST00000072753 Krtap3-2Q9D638 99 aa13.71□□□□□ -0.21
Ssbp3-202ENSMUST00000072753 Krtap3-3Q9D7P0 99 aa13.71□□□□□ -0.21
Ssbp3-202ENSMUST00000072753 Gm5767A0A0J9YTU8 78 aa13.64□□□□□ -0.23
Ssbp3-202ENSMUST00000072753 Rps28P62858 69 aaKnown RBP13.64□□□□□ -0.23
Ssbp3-202ENSMUST00000072753 Serp1Q9Z1W5 66 aa13.6□□□□□ -0.23
Ssbp3-202ENSMUST00000072753 Brk1Q91VR8 75 aa13.59□□□□□ -0.23
Ssbp3-202ENSMUST00000072753 Gm5965D3Z724 196 aa13.58□□□□□ -0.23
Ssbp3-202ENSMUST00000072753 Gm21798J3QNU5 87 aa13.58□□□□□ -0.24
Ssbp3-202ENSMUST00000072753 SvipQ3UZP4 77 aa13.57□□□□□ -0.24
Ssbp3-202ENSMUST00000072753 Herc1E9PZP8 4859 aa13.55□□□□□ -0.24
Ssbp3-202ENSMUST00000072753 Gm10999F6Q4M4 69 aa13.54□□□□□ -0.24
Ssbp3-202ENSMUST00000072753 Cdc42se1Q8BHL7 80 aa13.54□□□□□ -0.24
Ssbp3-202ENSMUST00000072753 Q8BGJ3 129 aa13.49□□□□□ -0.25
Ssbp3-202ENSMUST00000072753 Gm10643Q3URG9 111 aa13.46□□□□□ -0.25
Ssbp3-202ENSMUST00000072753 A930033H14RikG5E8X6 103 aa13.45□□□□□ -0.26
Ssbp3-202ENSMUST00000072753 Gm4491E0CX42 125 aa13.44□□□□□ -0.26
Ssbp3-202ENSMUST00000072753 2310034C09RikQ9D746 214 aa13.39□□□□□ -0.27
Ssbp3-202ENSMUST00000072753 Gm10197F6QEY5 67 aa13.37□□□□□ -0.27
Ssbp3-202ENSMUST00000072753 2310079G19RikQ9D6L6 185 aa13.33□□□□□ -0.28
Ssbp3-202ENSMUST00000072753 Krtap15-1Q9QZU5 150 aa13.33□□□□□ -0.28
Ssbp3-202ENSMUST00000072753 Gm18596A0A1W2P860 280 aa13.32□□□□□ -0.28
Ssbp3-202ENSMUST00000072753 Rpl37Q9D823 97 aa13.27□□□□□ -0.29
Ssbp3-202ENSMUST00000072753 4930507D05RikQ8C9C9 103 aa13.23□□□□□ -0.29
Ssbp3-202ENSMUST00000072753 Gm20661K7N787 53 aa13.19□□□□□ -0.3
Ssbp3-202ENSMUST00000072753 Phxr4P15974 95 aa13.18□□□□□ -0.3
Ssbp3-202ENSMUST00000072753 Gm9821Q8K076 103 aa13.18□□□□□ -0.3
Ssbp3-202ENSMUST00000072753 Rnase13Q5GAM7 153 aa13.12□□□□□ -0.31
Ssbp3-202ENSMUST00000072753 H2al1aQ5M8Q2 105 aa13.09□□□□□ -0.31
Ssbp3-202ENSMUST00000072753 H2al1eQ810S6 105 aa13.09□□□□□ -0.31
Ssbp3-202ENSMUST00000072753 Defb1P56386 69 aa13.05□□□□□ -0.32
Ssbp3-202ENSMUST00000072753 Ush2AQ2QI47 5193 aa13.01□□□□□ -0.33
Ssbp3-202ENSMUST00000072753 9230102O04RikA2ASX7 82 aa13□□□□□ -0.33
Ssbp3-202ENSMUST00000072753 H2al1bA0A087WP11 105 aa12.92□□□□□ -0.34
Ssbp3-202ENSMUST00000072753 SptssbQ925E8 76 aa12.92□□□□□ -0.34
Ssbp3-202ENSMUST00000072753 Prm1P02319 51 aa12.88□□□□□ -0.35
Ssbp3-202ENSMUST00000072753 Gm17416Q30KP4 66 aa12.85□□□□□ -0.35
Ssbp3-202ENSMUST00000072753 Gm9789Q8BIG3 52 aa12.85□□□□□ -0.35
Ssbp3-202ENSMUST00000072753 Hmcn2A2AJ76 5100 aa12.85□□□□□ -0.35
Ssbp3-202ENSMUST00000072753 Gm7735D3YX18 52 aa12.82□□□□□ -0.36
Ssbp3-202ENSMUST00000072753 Uqcr11Q9CPX8 56 aa12.82□□□□□ -0.36
Ssbp3-202ENSMUST00000072753 Ndufb1P0DN34 57 aa12.78□□□□□ -0.36
Ssbp3-202ENSMUST00000072753 2310057N15RikQ9D6T8 200 aa12.78□□□□□ -0.36
Ssbp3-202ENSMUST00000072753 Limd2Q8BGB5 128 aa12.76□□□□□ -0.37
Ssbp3-202ENSMUST00000072753 Sec61bQ9CQS8 96 aaKnown RBP12.76□□□□□ -0.37
Ssbp3-202ENSMUST00000072753 Ubr4A2AN08 5180 aa12.73□□□□□ -0.37
Ssbp3-202ENSMUST00000072753 Cox6b2Q80ZN9 88 aa12.71□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms