Protein–RNA interactions for Protein: J3QMJ4

Smlr1, Small leucine-rich protein 1, mousemouse

Predictions only

Length 66 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smlr1J3QMJ4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Smlr1J3QMJ4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Smlr1J3QMJ4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smlr1J3QMJ4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smlr1J3QMJ4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smlr1J3QMJ4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smlr1J3QMJ4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Smlr1J3QMJ4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smlr1J3QMJ4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Smlr1J3QMJ4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smlr1J3QMJ4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smlr1J3QMJ4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.83■□□□□ 0.76
Smlr1J3QMJ4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smlr1J3QMJ4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smlr1J3QMJ4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Smlr1J3QMJ4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smlr1J3QMJ4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smlr1J3QMJ4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smlr1J3QMJ4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Smlr1J3QMJ4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smlr1J3QMJ4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Smlr1J3QMJ4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smlr1J3QMJ4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smlr1J3QMJ4 Psd-208ENSMUST00000224556 2034 ntBASIC18.96■□□□□ 0.63
Smlr1J3QMJ4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smlr1J3QMJ4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Smlr1J3QMJ4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smlr1J3QMJ4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smlr1J3QMJ4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Smlr1J3QMJ4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smlr1J3QMJ4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smlr1J3QMJ4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smlr1J3QMJ4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smlr1J3QMJ4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smlr1J3QMJ4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Smlr1J3QMJ4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smlr1J3QMJ4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Smlr1J3QMJ4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smlr1J3QMJ4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smlr1J3QMJ4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smlr1J3QMJ4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smlr1J3QMJ4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smlr1J3QMJ4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smlr1J3QMJ4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.44■□□□□ 0.54
Smlr1J3QMJ4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smlr1J3QMJ4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smlr1J3QMJ4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smlr1J3QMJ4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smlr1J3QMJ4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smlr1J3QMJ4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smlr1J3QMJ4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smlr1J3QMJ4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Smlr1J3QMJ4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smlr1J3QMJ4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smlr1J3QMJ4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smlr1J3QMJ4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smlr1J3QMJ4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smlr1J3QMJ4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Smlr1J3QMJ4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smlr1J3QMJ4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Smlr1J3QMJ4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smlr1J3QMJ4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Smlr1J3QMJ4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smlr1J3QMJ4 Zxda-201ENSMUST00000117281 2621 ntBASIC18.16■□□□□ 0.5
Smlr1J3QMJ4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smlr1J3QMJ4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smlr1J3QMJ4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smlr1J3QMJ4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Smlr1J3QMJ4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Smlr1J3QMJ4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smlr1J3QMJ4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Smlr1J3QMJ4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smlr1J3QMJ4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smlr1J3QMJ4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Smlr1J3QMJ4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smlr1J3QMJ4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smlr1J3QMJ4 Gm42596-201ENSMUST00000196305 1958 ntBASIC17.91■□□□□ 0.46
Smlr1J3QMJ4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smlr1J3QMJ4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smlr1J3QMJ4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smlr1J3QMJ4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Smlr1J3QMJ4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smlr1J3QMJ4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smlr1J3QMJ4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smlr1J3QMJ4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Smlr1J3QMJ4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smlr1J3QMJ4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smlr1J3QMJ4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smlr1J3QMJ4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smlr1J3QMJ4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smlr1J3QMJ4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smlr1J3QMJ4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Smlr1J3QMJ4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smlr1J3QMJ4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smlr1J3QMJ4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Smlr1J3QMJ4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smlr1J3QMJ4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Smlr1J3QMJ4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Smlr1J3QMJ4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.73■□□□□ 0.43
Smlr1J3QMJ4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms