Protein–RNA interactions for Protein: P63054

Pcp4, Calmodulin regulator protein PCP4, mousemouse

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4P63054 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcp4P63054 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcp4P63054 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Pcp4P63054 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcp4P63054 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
Pcp4P63054 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Pcp4P63054 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcp4P63054 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcp4P63054 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcp4P63054 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Pcp4P63054 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcp4P63054 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcp4P63054 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcp4P63054 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Pcp4P63054 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcp4P63054 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcp4P63054 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pcp4P63054 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcp4P63054 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcp4P63054 Zxda-201ENSMUST00000117281 2621 ntBASIC20.55■□□□□ 0.88
Pcp4P63054 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcp4P63054 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcp4P63054 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcp4P63054 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcp4P63054 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcp4P63054 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcp4P63054 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Pcp4P63054 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcp4P63054 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcp4P63054 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcp4P63054 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcp4P63054 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcp4P63054 Psd-208ENSMUST00000224556 2034 ntBASIC20.15■□□□□ 0.82
Pcp4P63054 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcp4P63054 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcp4P63054 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.01■□□□□ 0.79
Pcp4P63054 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.94■□□□□ 0.78
Pcp4P63054 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcp4P63054 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcp4P63054 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Pcp4P63054 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcp4P63054 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcp4P63054 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcp4P63054 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcp4P63054 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcp4P63054 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcp4P63054 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcp4P63054 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcp4P63054 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Pcp4P63054 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.52■□□□□ 0.71
Pcp4P63054 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcp4P63054 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcp4P63054 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcp4P63054 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcp4P63054 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pcp4P63054 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcp4P63054 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcp4P63054 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcp4P63054 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcp4P63054 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pcp4P63054 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcp4P63054 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Pcp4P63054 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcp4P63054 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcp4P63054 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcp4P63054 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcp4P63054 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcp4P63054 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcp4P63054 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcp4P63054 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcp4P63054 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcp4P63054 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcp4P63054 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pcp4P63054 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcp4P63054 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pcp4P63054 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcp4P63054 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcp4P63054 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcp4P63054 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcp4P63054 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcp4P63054 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcp4P63054 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcp4P63054 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.98■□□□□ 0.63
Pcp4P63054 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Pcp4P63054 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcp4P63054 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Pcp4P63054 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcp4P63054 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Pcp4P63054 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcp4P63054 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcp4P63054 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pcp4P63054 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcp4P63054 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcp4P63054 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcp4P63054 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcp4P63054 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcp4P63054 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcp4P63054 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Pcp4P63054 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcp4P63054 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms