Protein–RNA interactions for Protein: Q61268

Apoc4, Apolipoprotein C-IV, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc4Q61268 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Apoc4Q61268 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Apoc4Q61268 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Apoc4Q61268 Psd-208ENSMUST00000224556 2034 ntBASIC20.01■□□□□ 0.79
Apoc4Q61268 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Apoc4Q61268 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Apoc4Q61268 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Apoc4Q61268 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Apoc4Q61268 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Apoc4Q61268 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Apoc4Q61268 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Apoc4Q61268 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Apoc4Q61268 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apoc4Q61268 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Apoc4Q61268 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Apoc4Q61268 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Apoc4Q61268 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Apoc4Q61268 Gm25239-201ENSMUST00000174915 86 ntBASIC19.09■□□□□ 0.65
Apoc4Q61268 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Apoc4Q61268 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.99■□□□□ 0.63
Apoc4Q61268 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Apoc4Q61268 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Apoc4Q61268 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Apoc4Q61268 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Apoc4Q61268 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Apoc4Q61268 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.75■□□□□ 0.59
Apoc4Q61268 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Apoc4Q61268 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Apoc4Q61268 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Apoc4Q61268 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Apoc4Q61268 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Apoc4Q61268 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Apoc4Q61268 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Apoc4Q61268 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Apoc4Q61268 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Apoc4Q61268 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Apoc4Q61268 Zxda-201ENSMUST00000117281 2621 ntBASIC18.41■□□□□ 0.54
Apoc4Q61268 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.39■□□□□ 0.53
Apoc4Q61268 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Apoc4Q61268 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.31■□□□□ 0.52
Apoc4Q61268 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Apoc4Q61268 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Apoc4Q61268 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Apoc4Q61268 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Apoc4Q61268 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Apoc4Q61268 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Apoc4Q61268 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Apoc4Q61268 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Apoc4Q61268 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Apoc4Q61268 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Apoc4Q61268 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Apoc4Q61268 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Apoc4Q61268 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Apoc4Q61268 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Apoc4Q61268 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Apoc4Q61268 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Apoc4Q61268 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Apoc4Q61268 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Apoc4Q61268 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Apoc4Q61268 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Apoc4Q61268 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Apoc4Q61268 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Apoc4Q61268 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Apoc4Q61268 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Apoc4Q61268 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC17.72■□□□□ 0.43
Apoc4Q61268 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Apoc4Q61268 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.65■□□□□ 0.42
Apoc4Q61268 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Apoc4Q61268 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Apoc4Q61268 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Apoc4Q61268 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Apoc4Q61268 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Apoc4Q61268 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Apoc4Q61268 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Apoc4Q61268 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Apoc4Q61268 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Apoc4Q61268 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Apoc4Q61268 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Apoc4Q61268 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Apoc4Q61268 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Apoc4Q61268 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Apoc4Q61268 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Apoc4Q61268 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Apoc4Q61268 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Apoc4Q61268 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Apoc4Q61268 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Apoc4Q61268 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Apoc4Q61268 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Apoc4Q61268 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Apoc4Q61268 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.3■□□□□ 0.36
Apoc4Q61268 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Apoc4Q61268 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Apoc4Q61268 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Apoc4Q61268 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Apoc4Q61268 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Apoc4Q61268 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.21■□□□□ 0.35
Apoc4Q61268 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Apoc4Q61268 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Apoc4Q61268 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Apoc4Q61268 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms