Protein–RNA interactions for Protein: Q5SSE9

Abca13, ATP-binding cassette sub-family A member 13, mousemouse

Predictions only

Length 5,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca13Q5SSE9 Gm25239-201ENSMUST00000174915 86 ntBASIC24.75■■□□□ 1.55
Abca13Q5SSE9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Abca13Q5SSE9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Abca13Q5SSE9 Gm24109-201ENSMUST00000175489 103 ntBASIC21.96■■□□□ 1.11
Abca13Q5SSE9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Abca13Q5SSE9 Gm15042-201ENSMUST00000120212 883 ntBASIC20.99■□□□□ 0.95
Abca13Q5SSE9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Abca13Q5SSE9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Abca13Q5SSE9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Abca13Q5SSE9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.6■□□□□ 0.89
Abca13Q5SSE9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Abca13Q5SSE9 Gm15045-201ENSMUST00000117359 883 ntBASIC20.56■□□□□ 0.88
Abca13Q5SSE9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Abca13Q5SSE9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Abca13Q5SSE9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.46■□□□□ 0.87
Abca13Q5SSE9 Gm23366-201ENSMUST00000175022 89 ntBASIC20.41■□□□□ 0.86
Abca13Q5SSE9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.8■□□□□ 0.76
Abca13Q5SSE9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Abca13Q5SSE9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Abca13Q5SSE9 Gm25238-201ENSMUST00000174914 89 ntBASIC19.73■□□□□ 0.75
Abca13Q5SSE9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
Abca13Q5SSE9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Abca13Q5SSE9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Abca13Q5SSE9 Gm25262-201ENSMUST00000174934 133 ntBASIC19.38■□□□□ 0.69
Abca13Q5SSE9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Abca13Q5SSE9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Abca13Q5SSE9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Abca13Q5SSE9 Gm26115-201ENSMUST00000175605 87 ntBASIC19.2■□□□□ 0.66
Abca13Q5SSE9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Abca13Q5SSE9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.13■□□□□ 0.65
Abca13Q5SSE9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.12■□□□□ 0.65
Abca13Q5SSE9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.94■□□□□ 0.62
Abca13Q5SSE9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Abca13Q5SSE9 Gm8109-201ENSMUST00000194076 746 ntBASIC18.89■□□□□ 0.61
Abca13Q5SSE9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abca13Q5SSE9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.88■□□□□ 0.61
Abca13Q5SSE9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.81■□□□□ 0.6
Abca13Q5SSE9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abca13Q5SSE9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abca13Q5SSE9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abca13Q5SSE9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.59■□□□□ 0.57
Abca13Q5SSE9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.57■□□□□ 0.56
Abca13Q5SSE9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abca13Q5SSE9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abca13Q5SSE9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.51■□□□□ 0.55
Abca13Q5SSE9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Abca13Q5SSE9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Abca13Q5SSE9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Abca13Q5SSE9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18.39■□□□□ 0.53
Abca13Q5SSE9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abca13Q5SSE9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.37■□□□□ 0.53
Abca13Q5SSE9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abca13Q5SSE9 Gm24804-201ENSMUST00000174982 85 ntBASIC18.35■□□□□ 0.53
Abca13Q5SSE9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abca13Q5SSE9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abca13Q5SSE9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abca13Q5SSE9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abca13Q5SSE9 Rab21-202ENSMUST00000218831 843 ntBASIC18.34■□□□□ 0.53
Abca13Q5SSE9 Gm27325-201ENSMUST00000175467 74 ntBASIC18.29■□□□□ 0.52
Abca13Q5SSE9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.25■□□□□ 0.51
Abca13Q5SSE9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Abca13Q5SSE9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.18■□□□□ 0.5
Abca13Q5SSE9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.17■□□□□ 0.5
Abca13Q5SSE9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Abca13Q5SSE9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Abca13Q5SSE9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.09■□□□□ 0.49
Abca13Q5SSE9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abca13Q5SSE9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.07■□□□□ 0.48
Abca13Q5SSE9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abca13Q5SSE9 Zfp131-205ENSMUST00000223812 663 ntBASIC18.06■□□□□ 0.48
Abca13Q5SSE9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Abca13Q5SSE9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abca13Q5SSE9 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.01■□□□□ 0.47
Abca13Q5SSE9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abca13Q5SSE9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abca13Q5SSE9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abca13Q5SSE9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.88■□□□□ 0.45
Abca13Q5SSE9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abca13Q5SSE9 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.86■□□□□ 0.45
Abca13Q5SSE9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abca13Q5SSE9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.8■□□□□ 0.44
Abca13Q5SSE9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.79■□□□□ 0.44
Abca13Q5SSE9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Abca13Q5SSE9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.76■□□□□ 0.43
Abca13Q5SSE9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abca13Q5SSE9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Abca13Q5SSE9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.66■□□□□ 0.42
Abca13Q5SSE9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abca13Q5SSE9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.62■□□□□ 0.41
Abca13Q5SSE9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abca13Q5SSE9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abca13Q5SSE9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.6■□□□□ 0.41
Abca13Q5SSE9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Abca13Q5SSE9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.58■□□□□ 0.4
Abca13Q5SSE9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.56■□□□□ 0.4
Abca13Q5SSE9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abca13Q5SSE9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Abca13Q5SSE9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abca13Q5SSE9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Abca13Q5SSE9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms