Protein–RNA interactions for Protein: Q8BNA6

Fat3, Protocadherin Fat 3, mousemouse

Predictions only

Length 4,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fat3Q8BNA6 Gm25239-201ENSMUST00000174915 86 ntBASIC24.33■■□□□ 1.48
Fat3Q8BNA6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Fat3Q8BNA6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Fat3Q8BNA6 Gm24109-201ENSMUST00000175489 103 ntBASIC21.34■■□□□ 1.01
Fat3Q8BNA6 Gm15042-201ENSMUST00000120212 883 ntBASIC20.77■□□□□ 0.92
Fat3Q8BNA6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fat3Q8BNA6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fat3Q8BNA6 Gm15045-201ENSMUST00000117359 883 ntBASIC20.44■□□□□ 0.86
Fat3Q8BNA6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fat3Q8BNA6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Fat3Q8BNA6 Gm23366-201ENSMUST00000175022 89 ntBASIC20.04■□□□□ 0.8
Fat3Q8BNA6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.94■□□□□ 0.78
Fat3Q8BNA6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.88■□□□□ 0.77
Fat3Q8BNA6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fat3Q8BNA6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fat3Q8BNA6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Fat3Q8BNA6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fat3Q8BNA6 Gm25238-201ENSMUST00000174914 89 ntBASIC19.38■□□□□ 0.69
Fat3Q8BNA6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fat3Q8BNA6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Fat3Q8BNA6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.2■□□□□ 0.66
Fat3Q8BNA6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fat3Q8BNA6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Fat3Q8BNA6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Fat3Q8BNA6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fat3Q8BNA6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Fat3Q8BNA6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Fat3Q8BNA6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fat3Q8BNA6 Gm25262-201ENSMUST00000174934 133 ntBASIC18.64■□□□□ 0.57
Fat3Q8BNA6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Fat3Q8BNA6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fat3Q8BNA6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.55■□□□□ 0.56
Fat3Q8BNA6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.48■□□□□ 0.55
Fat3Q8BNA6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18.47■□□□□ 0.55
Fat3Q8BNA6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fat3Q8BNA6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fat3Q8BNA6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fat3Q8BNA6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fat3Q8BNA6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.33■□□□□ 0.52
Fat3Q8BNA6 Gm26115-201ENSMUST00000175605 87 ntBASIC18.29■□□□□ 0.52
Fat3Q8BNA6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.29■□□□□ 0.52
Fat3Q8BNA6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fat3Q8BNA6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.28■□□□□ 0.52
Fat3Q8BNA6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Fat3Q8BNA6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
Fat3Q8BNA6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.23■□□□□ 0.51
Fat3Q8BNA6 Gm27325-201ENSMUST00000175467 74 ntBASIC18.23■□□□□ 0.51
Fat3Q8BNA6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fat3Q8BNA6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.19■□□□□ 0.5
Fat3Q8BNA6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fat3Q8BNA6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Fat3Q8BNA6 Rab21-202ENSMUST00000218831 843 ntBASIC18.08■□□□□ 0.48
Fat3Q8BNA6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Fat3Q8BNA6 Gm8109-201ENSMUST00000194076 746 ntBASIC18.06■□□□□ 0.48
Fat3Q8BNA6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Fat3Q8BNA6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC17.99■□□□□ 0.47
Fat3Q8BNA6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fat3Q8BNA6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Fat3Q8BNA6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.91■□□□□ 0.46
Fat3Q8BNA6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.9■□□□□ 0.46
Fat3Q8BNA6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fat3Q8BNA6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fat3Q8BNA6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Fat3Q8BNA6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Fat3Q8BNA6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.72■□□□□ 0.43
Fat3Q8BNA6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fat3Q8BNA6 Gm24804-201ENSMUST00000174982 85 ntBASIC17.65■□□□□ 0.42
Fat3Q8BNA6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fat3Q8BNA6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Fat3Q8BNA6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fat3Q8BNA6 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.6■□□□□ 0.41
Fat3Q8BNA6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fat3Q8BNA6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.57■□□□□ 0.4
Fat3Q8BNA6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC17.52■□□□□ 0.4
Fat3Q8BNA6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fat3Q8BNA6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fat3Q8BNA6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fat3Q8BNA6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fat3Q8BNA6 Gm27322-201ENSMUST00000184007 104 ntBASIC17.38■□□□□ 0.37
Fat3Q8BNA6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.37■□□□□ 0.37
Fat3Q8BNA6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.37■□□□□ 0.37
Fat3Q8BNA6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fat3Q8BNA6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fat3Q8BNA6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.35■□□□□ 0.37
Fat3Q8BNA6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fat3Q8BNA6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.35■□□□□ 0.37
Fat3Q8BNA6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.34■□□□□ 0.37
Fat3Q8BNA6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.33■□□□□ 0.36
Fat3Q8BNA6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fat3Q8BNA6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fat3Q8BNA6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Fat3Q8BNA6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fat3Q8BNA6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.25■□□□□ 0.35
Fat3Q8BNA6 Psd-208ENSMUST00000224556 2034 ntBASIC17.25■□□□□ 0.35
Fat3Q8BNA6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17.25■□□□□ 0.35
Fat3Q8BNA6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Fat3Q8BNA6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fat3Q8BNA6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Fat3Q8BNA6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fat3Q8BNA6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms