Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Gm25239-201ENSMUST00000174915 86 ntBASIC25.62■■□□□ 1.69
Herc2Q4U2R1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Herc2Q4U2R1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Herc2Q4U2R1 Gm24109-201ENSMUST00000175489 103 ntBASIC22.64■■□□□ 1.22
Herc2Q4U2R1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Herc2Q4U2R1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Herc2Q4U2R1 Gm15042-201ENSMUST00000120212 883 ntBASIC21.58■■□□□ 1.05
Herc2Q4U2R1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Herc2Q4U2R1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Herc2Q4U2R1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Herc2Q4U2R1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.17■□□□□ 0.98
Herc2Q4U2R1 Gm23366-201ENSMUST00000175022 89 ntBASIC21.14■□□□□ 0.97
Herc2Q4U2R1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.11■□□□□ 0.97
Herc2Q4U2R1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Herc2Q4U2R1 Gm15045-201ENSMUST00000117359 883 ntBASIC21.06■□□□□ 0.96
Herc2Q4U2R1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Herc2Q4U2R1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Herc2Q4U2R1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.47■□□□□ 0.87
Herc2Q4U2R1 Gm25238-201ENSMUST00000174914 89 ntBASIC20.45■□□□□ 0.86
Herc2Q4U2R1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Herc2Q4U2R1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Herc2Q4U2R1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Herc2Q4U2R1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Herc2Q4U2R1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Herc2Q4U2R1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Herc2Q4U2R1 Gm25262-201ENSMUST00000174934 133 ntBASIC19.93■□□□□ 0.78
Herc2Q4U2R1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
Herc2Q4U2R1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Herc2Q4U2R1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.68■□□□□ 0.74
Herc2Q4U2R1 Gm26115-201ENSMUST00000175605 87 ntBASIC19.65■□□□□ 0.74
Herc2Q4U2R1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.61■□□□□ 0.73
Herc2Q4U2R1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.61■□□□□ 0.73
Herc2Q4U2R1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Herc2Q4U2R1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Herc2Q4U2R1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.39■□□□□ 0.69
Herc2Q4U2R1 Gm8109-201ENSMUST00000194076 746 ntBASIC19.36■□□□□ 0.69
Herc2Q4U2R1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Herc2Q4U2R1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.3■□□□□ 0.68
Herc2Q4U2R1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.21■□□□□ 0.67
Herc2Q4U2R1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.08■□□□□ 0.64
Herc2Q4U2R1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Herc2Q4U2R1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Herc2Q4U2R1 Rab21-202ENSMUST00000218831 843 ntBASIC18.96■□□□□ 0.63
Herc2Q4U2R1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Herc2Q4U2R1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Herc2Q4U2R1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.88■□□□□ 0.61
Herc2Q4U2R1 Gm24804-201ENSMUST00000174982 85 ntBASIC18.85■□□□□ 0.61
Herc2Q4U2R1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Herc2Q4U2R1 Gm27325-201ENSMUST00000175467 74 ntBASIC18.8■□□□□ 0.6
Herc2Q4U2R1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Herc2Q4U2R1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Herc2Q4U2R1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.75■□□□□ 0.59
Herc2Q4U2R1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Herc2Q4U2R1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.74■□□□□ 0.59
Herc2Q4U2R1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Herc2Q4U2R1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.69■□□□□ 0.58
Herc2Q4U2R1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Herc2Q4U2R1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Herc2Q4U2R1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Herc2Q4U2R1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Herc2Q4U2R1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Herc2Q4U2R1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Herc2Q4U2R1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Herc2Q4U2R1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Herc2Q4U2R1 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.51■□□□□ 0.55
Herc2Q4U2R1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Herc2Q4U2R1 Zfp131-205ENSMUST00000223812 663 ntBASIC18.47■□□□□ 0.55
Herc2Q4U2R1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.46■□□□□ 0.55
Herc2Q4U2R1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Herc2Q4U2R1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18.45■□□□□ 0.54
Herc2Q4U2R1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.4■□□□□ 0.54
Herc2Q4U2R1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.39■□□□□ 0.53
Herc2Q4U2R1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Herc2Q4U2R1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Herc2Q4U2R1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Herc2Q4U2R1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Herc2Q4U2R1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Herc2Q4U2R1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Herc2Q4U2R1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.26■□□□□ 0.51
Herc2Q4U2R1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Herc2Q4U2R1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.25■□□□□ 0.51
Herc2Q4U2R1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Herc2Q4U2R1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Herc2Q4U2R1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Herc2Q4U2R1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Herc2Q4U2R1 Gm27322-201ENSMUST00000184007 104 ntBASIC18.18■□□□□ 0.5
Herc2Q4U2R1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.15■□□□□ 0.5
Herc2Q4U2R1 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.15■□□□□ 0.5
Herc2Q4U2R1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.14■□□□□ 0.5
Herc2Q4U2R1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Herc2Q4U2R1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Herc2Q4U2R1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Herc2Q4U2R1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.07■□□□□ 0.48
Herc2Q4U2R1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.05■□□□□ 0.48
Herc2Q4U2R1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Herc2Q4U2R1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.01■□□□□ 0.47
Herc2Q4U2R1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Herc2Q4U2R1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Herc2Q4U2R1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Herc2Q4U2R1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 171.3 ms