Protein–RNA interactions for Protein: P02319

Prm1, Sperm protamine P1, mousemouse

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prm1P02319 Gm25239-201ENSMUST00000174915 86 ntBASIC23.24■■□□□ 1.31
Prm1P02319 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Prm1P02319 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prm1P02319 Gm24109-201ENSMUST00000175489 103 ntBASIC20.54■□□□□ 0.88
Prm1P02319 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prm1P02319 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prm1P02319 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prm1P02319 Gm15042-201ENSMUST00000120212 883 ntBASIC19.6■□□□□ 0.73
Prm1P02319 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prm1P02319 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.38■□□□□ 0.69
Prm1P02319 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prm1P02319 Gm23366-201ENSMUST00000175022 89 ntBASIC19.31■□□□□ 0.68
Prm1P02319 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prm1P02319 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Prm1P02319 Gm15045-201ENSMUST00000117359 883 ntBASIC19.05■□□□□ 0.64
Prm1P02319 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.05■□□□□ 0.64
Prm1P02319 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prm1P02319 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.67■□□□□ 0.58
Prm1P02319 Gm25238-201ENSMUST00000174914 89 ntBASIC18.59■□□□□ 0.57
Prm1P02319 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prm1P02319 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prm1P02319 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
Prm1P02319 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Prm1P02319 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Prm1P02319 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prm1P02319 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Prm1P02319 Gm25262-201ENSMUST00000174934 133 ntBASIC18.17■□□□□ 0.5
Prm1P02319 Gm26115-201ENSMUST00000175605 87 ntBASIC18.03■□□□□ 0.48
Prm1P02319 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.03■□□□□ 0.48
Prm1P02319 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.95■□□□□ 0.46
Prm1P02319 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC17.9■□□□□ 0.46
Prm1P02319 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prm1P02319 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Prm1P02319 Gm8109-201ENSMUST00000194076 746 ntBASIC17.81■□□□□ 0.44
Prm1P02319 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC17.64■□□□□ 0.41
Prm1P02319 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prm1P02319 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.58■□□□□ 0.4
Prm1P02319 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC17.5■□□□□ 0.39
Prm1P02319 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prm1P02319 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC17.28■□□□□ 0.36
Prm1P02319 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prm1P02319 Rab21-202ENSMUST00000218831 843 ntBASIC17.22■□□□□ 0.35
Prm1P02319 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prm1P02319 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Prm1P02319 Gm24804-201ENSMUST00000174982 85 ntBASIC17.17■□□□□ 0.34
Prm1P02319 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prm1P02319 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.14■□□□□ 0.33
Prm1P02319 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.14■□□□□ 0.33
Prm1P02319 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prm1P02319 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prm1P02319 Gm27325-201ENSMUST00000175467 74 ntBASIC17.06■□□□□ 0.32
Prm1P02319 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prm1P02319 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC17■□□□□ 0.31
Prm1P02319 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prm1P02319 Zfp131-205ENSMUST00000223812 663 ntBASIC16.97■□□□□ 0.31
Prm1P02319 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC16.96■□□□□ 0.31
Prm1P02319 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prm1P02319 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Prm1P02319 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prm1P02319 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prm1P02319 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prm1P02319 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prm1P02319 Gm17082-201ENSMUST00000166043 1091 ntBASIC16.83■□□□□ 0.28
Prm1P02319 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prm1P02319 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.8■□□□□ 0.28
Prm1P02319 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC16.77■□□□□ 0.28
Prm1P02319 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prm1P02319 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.71■□□□□ 0.27
Prm1P02319 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prm1P02319 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.64■□□□□ 0.25
Prm1P02319 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prm1P02319 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.59■□□□□ 0.25
Prm1P02319 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prm1P02319 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prm1P02319 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Prm1P02319 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Prm1P02319 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prm1P02319 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prm1P02319 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prm1P02319 Gm27322-201ENSMUST00000184007 104 ntBASIC16.54■□□□□ 0.24
Prm1P02319 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.53■□□□□ 0.24
Prm1P02319 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.53■□□□□ 0.24
Prm1P02319 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prm1P02319 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC16.49■□□□□ 0.23
Prm1P02319 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Prm1P02319 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prm1P02319 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prm1P02319 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Prm1P02319 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prm1P02319 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prm1P02319 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Prm1P02319 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prm1P02319 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prm1P02319 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC16.39■□□□□ 0.21
Prm1P02319 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Prm1P02319 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.36■□□□□ 0.21
Prm1P02319 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prm1P02319 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC16.34■□□□□ 0.21
Prm1P02319 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC16.34■□□□□ 0.21
Prm1P02319 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms