Protein–RNA interactions for Protein: Q8BHL7

Cdc42se1, CDC42 small effector protein 1, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42se1Q8BHL7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdc42se1Q8BHL7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdc42se1Q8BHL7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdc42se1Q8BHL7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cdc42se1Q8BHL7 Psd-208ENSMUST00000224556 2034 ntBASIC18.45■□□□□ 0.54
Cdc42se1Q8BHL7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cdc42se1Q8BHL7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdc42se1Q8BHL7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdc42se1Q8BHL7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdc42se1Q8BHL7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdc42se1Q8BHL7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdc42se1Q8BHL7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Cdc42se1Q8BHL7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdc42se1Q8BHL7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdc42se1Q8BHL7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cdc42se1Q8BHL7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdc42se1Q8BHL7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdc42se1Q8BHL7 Gm42596-201ENSMUST00000196305 1958 ntBASIC17.36■□□□□ 0.37
Cdc42se1Q8BHL7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc42se1Q8BHL7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdc42se1Q8BHL7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdc42se1Q8BHL7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdc42se1Q8BHL7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdc42se1Q8BHL7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cdc42se1Q8BHL7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdc42se1Q8BHL7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdc42se1Q8BHL7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdc42se1Q8BHL7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdc42se1Q8BHL7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdc42se1Q8BHL7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cdc42se1Q8BHL7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC16.85■□□□□ 0.29
Cdc42se1Q8BHL7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdc42se1Q8BHL7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cdc42se1Q8BHL7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdc42se1Q8BHL7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdc42se1Q8BHL7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cdc42se1Q8BHL7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdc42se1Q8BHL7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdc42se1Q8BHL7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC16.59■□□□□ 0.25
Cdc42se1Q8BHL7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Cdc42se1Q8BHL7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC16.53■□□□□ 0.24
Cdc42se1Q8BHL7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdc42se1Q8BHL7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdc42se1Q8BHL7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdc42se1Q8BHL7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdc42se1Q8BHL7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdc42se1Q8BHL7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdc42se1Q8BHL7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdc42se1Q8BHL7 Zxda-201ENSMUST00000117281 2621 ntBASIC16.41■□□□□ 0.22
Cdc42se1Q8BHL7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdc42se1Q8BHL7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdc42se1Q8BHL7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdc42se1Q8BHL7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc42se1Q8BHL7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC16.29■□□□□ 0.2
Cdc42se1Q8BHL7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdc42se1Q8BHL7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdc42se1Q8BHL7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdc42se1Q8BHL7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cdc42se1Q8BHL7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdc42se1Q8BHL7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdc42se1Q8BHL7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdc42se1Q8BHL7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cdc42se1Q8BHL7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdc42se1Q8BHL7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Cdc42se1Q8BHL7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdc42se1Q8BHL7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC16.06■□□□□ 0.16
Cdc42se1Q8BHL7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdc42se1Q8BHL7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdc42se1Q8BHL7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Cdc42se1Q8BHL7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cdc42se1Q8BHL7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc42se1Q8BHL7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cdc42se1Q8BHL7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdc42se1Q8BHL7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdc42se1Q8BHL7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdc42se1Q8BHL7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Cdc42se1Q8BHL7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdc42se1Q8BHL7 Gm10524-201ENSMUST00000181931 1893 ntBASIC15.88■□□□□ 0.13
Cdc42se1Q8BHL7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc42se1Q8BHL7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdc42se1Q8BHL7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdc42se1Q8BHL7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdc42se1Q8BHL7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdc42se1Q8BHL7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdc42se1Q8BHL7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdc42se1Q8BHL7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cdc42se1Q8BHL7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC15.8■□□□□ 0.12
Cdc42se1Q8BHL7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdc42se1Q8BHL7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdc42se1Q8BHL7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc42se1Q8BHL7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdc42se1Q8BHL7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Cdc42se1Q8BHL7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc42se1Q8BHL7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cdc42se1Q8BHL7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdc42se1Q8BHL7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdc42se1Q8BHL7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cdc42se1Q8BHL7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdc42se1Q8BHL7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdc42se1Q8BHL7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms