Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm25239-201ENSMUST00000174915 86 ntBASIC24.3■■□□□ 1.48
Herc1E9PZP8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Herc1E9PZP8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Herc1E9PZP8 Gm24109-201ENSMUST00000175489 103 ntBASIC21.6■■□□□ 1.05
Herc1E9PZP8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Herc1E9PZP8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc1E9PZP8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Herc1E9PZP8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Herc1E9PZP8 Gm15042-201ENSMUST00000120212 883 ntBASIC20.3■□□□□ 0.84
Herc1E9PZP8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Herc1E9PZP8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.22■□□□□ 0.83
Herc1E9PZP8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.16■□□□□ 0.82
Herc1E9PZP8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Herc1E9PZP8 Gm23366-201ENSMUST00000175022 89 ntBASIC19.98■□□□□ 0.79
Herc1E9PZP8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Herc1E9PZP8 Gm15045-201ENSMUST00000117359 883 ntBASIC19.82■□□□□ 0.76
Herc1E9PZP8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.5■□□□□ 0.71
Herc1E9PZP8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Herc1E9PZP8 Gm25238-201ENSMUST00000174914 89 ntBASIC19.48■□□□□ 0.71
Herc1E9PZP8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Herc1E9PZP8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Herc1E9PZP8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
Herc1E9PZP8 Gm25262-201ENSMUST00000174934 133 ntBASIC19.07■□□□□ 0.64
Herc1E9PZP8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Herc1E9PZP8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Herc1E9PZP8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Herc1E9PZP8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Herc1E9PZP8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Herc1E9PZP8 Gm26115-201ENSMUST00000175605 87 ntBASIC18.82■□□□□ 0.6
Herc1E9PZP8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.78■□□□□ 0.6
Herc1E9PZP8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.74■□□□□ 0.59
Herc1E9PZP8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.6■□□□□ 0.57
Herc1E9PZP8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Herc1E9PZP8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.57■□□□□ 0.56
Herc1E9PZP8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Herc1E9PZP8 Gm8109-201ENSMUST00000194076 746 ntBASIC18.52■□□□□ 0.56
Herc1E9PZP8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Herc1E9PZP8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.31■□□□□ 0.52
Herc1E9PZP8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.17■□□□□ 0.5
Herc1E9PZP8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.1■□□□□ 0.49
Herc1E9PZP8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.09■□□□□ 0.49
Herc1E9PZP8 Gm24804-201ENSMUST00000174982 85 ntBASIC18.05■□□□□ 0.48
Herc1E9PZP8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Herc1E9PZP8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Herc1E9PZP8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18■□□□□ 0.47
Herc1E9PZP8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Herc1E9PZP8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.94■□□□□ 0.46
Herc1E9PZP8 Rab21-202ENSMUST00000218831 843 ntBASIC17.93■□□□□ 0.46
Herc1E9PZP8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.93■□□□□ 0.46
Herc1E9PZP8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Herc1E9PZP8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.9■□□□□ 0.46
Herc1E9PZP8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Herc1E9PZP8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Herc1E9PZP8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC17.75■□□□□ 0.43
Herc1E9PZP8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Herc1E9PZP8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.73■□□□□ 0.43
Herc1E9PZP8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Herc1E9PZP8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Herc1E9PZP8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Herc1E9PZP8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Herc1E9PZP8 Gm27325-201ENSMUST00000175467 74 ntBASIC17.71■□□□□ 0.43
Herc1E9PZP8 Zfp131-205ENSMUST00000223812 663 ntBASIC17.69■□□□□ 0.42
Herc1E9PZP8 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.55■□□□□ 0.4
Herc1E9PZP8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Herc1E9PZP8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc1E9PZP8 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.53■□□□□ 0.4
Herc1E9PZP8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.53■□□□□ 0.4
Herc1E9PZP8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.51■□□□□ 0.39
Herc1E9PZP8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Herc1E9PZP8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Herc1E9PZP8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.41■□□□□ 0.38
Herc1E9PZP8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Herc1E9PZP8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Herc1E9PZP8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.3■□□□□ 0.36
Herc1E9PZP8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Herc1E9PZP8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Herc1E9PZP8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Herc1E9PZP8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Herc1E9PZP8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.27■□□□□ 0.35
Herc1E9PZP8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Herc1E9PZP8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.25■□□□□ 0.35
Herc1E9PZP8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Herc1E9PZP8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Herc1E9PZP8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Herc1E9PZP8 Gm27322-201ENSMUST00000184007 104 ntBASIC17.21■□□□□ 0.35
Herc1E9PZP8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Herc1E9PZP8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Herc1E9PZP8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Herc1E9PZP8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Herc1E9PZP8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Herc1E9PZP8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Herc1E9PZP8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Herc1E9PZP8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.15■□□□□ 0.34
Herc1E9PZP8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Herc1E9PZP8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.14■□□□□ 0.33
Herc1E9PZP8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC17.13■□□□□ 0.33
Herc1E9PZP8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.09■□□□□ 0.33
Herc1E9PZP8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herc1E9PZP8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herc1E9PZP8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms