RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Plscr4P58196 326 aa8.86□□□□□ -0.99
Hmgb1-208ENSMUST00000139443 H2al1nQ497L1 109 aa8.86□□□□□ -0.99
Hmgb1-208ENSMUST00000139443 A930002H24RikQ8C8Y3 163 aa8.86□□□□□ -0.99
Hmgb1-208ENSMUST00000139443 Igkv4-58A0A0G2JGI6 119 aa8.85□□□□□ -0.99
Hmgb1-208ENSMUST00000139443 Lamtor3O88653 124 aa8.85□□□□□ -0.99
Hmgb1-208ENSMUST00000139443 Smim1P0C8K7 78 aa8.84□□□□□ -0.99
Hmgb1-208ENSMUST00000139443 Gm7102J3QQ10 178 aa8.83□□□□□ -1
Hmgb1-208ENSMUST00000139443 SelenowP63300 88 aa8.83□□□□□ -1
Hmgb1-208ENSMUST00000139443 Uqcc3Q8K2T4 89 aa8.83□□□□□ -1
Hmgb1-208ENSMUST00000139443 Vamp8O70404 101 aa8.82□□□□□ -1
Hmgb1-208ENSMUST00000139443 Gm5142Q8C5X9 133 aa8.82□□□□□ -1
Hmgb1-208ENSMUST00000139443 Cited4Q9WUL8 182 aa8.82□□□□□ -1
Hmgb1-208ENSMUST00000139443 A0A286YE02 88 aa8.81□□□□□ -1
Hmgb1-208ENSMUST00000139443 Vpreb3D3Z6J4 130 aa8.81□□□□□ -1
Hmgb1-208ENSMUST00000139443 Rps29P62274 56 aa8.81□□□□□ -1
Hmgb1-208ENSMUST00000139443 Smim26Q3V460 107 aa8.81□□□□□ -1
Hmgb1-208ENSMUST00000139443 Defb29Q8BGW9 78 aa8.81□□□□□ -1
Hmgb1-208ENSMUST00000139443 Cdip1Q9DB75 208 aa8.81□□□□□ -1
Hmgb1-208ENSMUST00000139443 P0C913 63 aa8.8□□□□□ -1
Hmgb1-208ENSMUST00000139443 Pam16Q9CQV1 125 aa8.8□□□□□ -1
Hmgb1-208ENSMUST00000139443 Ighv10-1A0A0B4J1J6 119 aa8.79□□□□□ -1
Hmgb1-208ENSMUST00000139443 Defb37Q7TMD2 62 aa8.79□□□□□ -1
Hmgb1-208ENSMUST00000139443 Gm5767A0A0J9YTU8 78 aa8.77□□□□□ -1.01
Hmgb1-208ENSMUST00000139443 Defb45Q3V490 66 aa8.77□□□□□ -1.01
Hmgb1-208ENSMUST00000139443 Rab37Q9JKM7 223 aa8.77□□□□□ -1.01
Hmgb1-208ENSMUST00000139443 Igkv3-4A0A140T8Q4 119 aa8.75□□□□□ -1.01
Hmgb1-208ENSMUST00000139443 BC107364E9Q5A2 140 aa8.74□□□□□ -1.01
Hmgb1-208ENSMUST00000139443 Vmn1r197Q8R265 298 aa8.73□□□□□ -1.01
Hmgb1-208ENSMUST00000139443 Gm10320E9PW43 113 aa8.72□□□□□ -1.01
Hmgb1-208ENSMUST00000139443 Gm10401E9Q3K6 71 aa8.71□□□□□ -1.02
Hmgb1-208ENSMUST00000139443 Gemin7Q9CWY4 129 aa8.71□□□□□ -1.02
Hmgb1-208ENSMUST00000139443 Gm37389A0A0A6YW05 95 aa8.7□□□□□ -1.02
Hmgb1-208ENSMUST00000139443 Gm21886J3QJU9 214 aa8.7□□□□□ -1.02
Hmgb1-208ENSMUST00000139443 Eif4ebp3Q80VV3 101 aa8.7□□□□□ -1.02
Hmgb1-208ENSMUST00000139443 Tma7Q8K003 64 aaKnown RBP8.7□□□□□ -1.02
Hmgb1-208ENSMUST00000139443 Tal2Q62282 108 aa8.69□□□□□ -1.02
Hmgb1-208ENSMUST00000139443 A830005F24RikQ8BRT5 167 aa8.69□□□□□ -1.02
Hmgb1-208ENSMUST00000139443 Gm9821Q8K076 103 aa8.69□□□□□ -1.02
Hmgb1-208ENSMUST00000139443 Rpl39lQ9CQD0 51 aa8.68□□□□□ -1.02
Hmgb1-208ENSMUST00000139443 Gm16381A0A1Y7VKT9 73 aa8.66□□□□□ -1.02
Hmgb1-208ENSMUST00000139443 Trav3-4A0A075B654 114 aa8.65□□□□□ -1.02
Hmgb1-208ENSMUST00000139443 Gm2310J3QNJ2 377 aa8.65□□□□□ -1.02
Hmgb1-208ENSMUST00000139443 Igkv8-21A0A140T8P7 120 aa8.64□□□□□ -1.03
Hmgb1-208ENSMUST00000139443 CckP09240 115 aa8.64□□□□□ -1.03
Hmgb1-208ENSMUST00000139443 Q8BT88 171 aa8.63□□□□□ -1.03
Hmgb1-208ENSMUST00000139443 Ctxnd2A0A1B0GQX3 59 aa8.62□□□□□ -1.03
Hmgb1-208ENSMUST00000139443 Smr3aQ61900 147 aa8.62□□□□□ -1.03
Hmgb1-208ENSMUST00000139443 Grcc10O35127 126 aa8.61□□□□□ -1.03
Hmgb1-208ENSMUST00000139443 G0s2Q61585 103 aa8.61□□□□□ -1.03
Hmgb1-208ENSMUST00000139443 Igkv1-35A0A0G2JDE5 120 aa8.6□□□□□ -1.03
Hmgb1-208ENSMUST00000139443 Chchd10Q7TNL9 138 aa8.59□□□□□ -1.03
Hmgb1-208ENSMUST00000139443 P06320 134 aa8.58□□□□□ -1.04
Hmgb1-208ENSMUST00000139443 Tac4Q99N14 128 aa8.58□□□□□ -1.04
Hmgb1-208ENSMUST00000139443 Sfta2E9PXB6 77 aa8.57□□□□□ -1.04
Hmgb1-208ENSMUST00000139443 Sigmar1O55242 223 aa8.57□□□□□ -1.04
Hmgb1-208ENSMUST00000139443 Sec61bQ9CQS8 96 aaKnown RBP8.57□□□□□ -1.04
Hmgb1-208ENSMUST00000139443 Igkv2-109A0A075B5K6 120 aa8.56□□□□□ -1.04
Hmgb1-208ENSMUST00000139443 1700018G05RikA0A1B0GSI2 66 aa8.55□□□□□ -1.04
Hmgb1-208ENSMUST00000139443 Gm16253D3Z167 63 aa8.55□□□□□ -1.04
Hmgb1-208ENSMUST00000139443 4930535I16RikQ9CUI2 172 aa8.55□□□□□ -1.04
Hmgb1-208ENSMUST00000139443 Igkv8-28A0A0G2JE47 121 aa8.54□□□□□ -1.04
Hmgb1-208ENSMUST00000139443 1700020N15RikL7MTX3 112 aa8.53□□□□□ -1.04
Hmgb1-208ENSMUST00000139443 2310057N15RikQ9D6T8 200 aa8.53□□□□□ -1.04
Hmgb1-208ENSMUST00000139443 A730071L15RikQ8C4X0 137 aa8.52□□□□□ -1.05
Hmgb1-208ENSMUST00000139443 Krtap15-1Q9QZU5 150 aa8.52□□□□□ -1.05
Hmgb1-208ENSMUST00000139443 Krtap1-3A2A588 173 aa8.51□□□□□ -1.05
Hmgb1-208ENSMUST00000139443 Vps25Q9CQ80 176 aa8.5□□□□□ -1.05
Hmgb1-208ENSMUST00000139443 Gm29423A0A087WRM1 55 aa8.49□□□□□ -1.05
Hmgb1-208ENSMUST00000139443 ZanO88799 5376 aa8.48□□□□□ -1.05
Hmgb1-208ENSMUST00000139443 Gm12353A2AGJ4 60 aa8.48□□□□□ -1.05
Hmgb1-208ENSMUST00000139443 Cox6a2P43023 97 aa8.48□□□□□ -1.05
Hmgb1-208ENSMUST00000139443 9530003J23RikQ8BM26 151 aa8.48□□□□□ -1.05
Hmgb1-208ENSMUST00000139443 Defb47Q30KN1 79 aa8.47□□□□□ -1.05
Hmgb1-208ENSMUST00000139443 Smim13E9Q942 88 aa8.46□□□□□ -1.06
Hmgb1-208ENSMUST00000139443 Ifitm6A0A1B0GS75 124 aa8.45□□□□□ -1.06
Hmgb1-208ENSMUST00000139443 P01843 105 aa8.45□□□□□ -1.06
Hmgb1-208ENSMUST00000139443 Gm11939A2A592 99 aa8.43□□□□□ -1.06
Hmgb1-208ENSMUST00000139443 Crct1Q6PAI5 102 aa8.41□□□□□ -1.06
Hmgb1-208ENSMUST00000139443 4930524J08RikQ9CUJ5 163 aa8.41□□□□□ -1.06
Hmgb1-208ENSMUST00000139443 Igkv8-30A0A140T8M3 121 aa8.39□□□□□ -1.07
Hmgb1-208ENSMUST00000139443 Cox6cQ9CPQ1 76 aa8.39□□□□□ -1.07
Hmgb1-208ENSMUST00000139443 Ighv10-3A0A075B5T6 119 aa8.38□□□□□ -1.07
Hmgb1-208ENSMUST00000139443 Gm26620Q9CY65 116 aa8.38□□□□□ -1.07
Hmgb1-208ENSMUST00000139443 CenpwQ3URR0 86 aa8.37□□□□□ -1.07
Hmgb1-208ENSMUST00000139443 Fat4Q2PZL6 4981 aa8.36□□□□□ -1.07
Hmgb1-208ENSMUST00000139443 Ccl17F6R5P4 103 aa8.35□□□□□ -1.07
Hmgb1-208ENSMUST00000139443 Cypt15B1AXS0 87 aa8.34□□□□□ -1.07
Hmgb1-208ENSMUST00000139443 LorP18165 486 aa8.33□□□□□ -1.08
Hmgb1-208ENSMUST00000139443 Rpl37Q9D823 97 aa8.32□□□□□ -1.08
Hmgb1-208ENSMUST00000139443 Cby1Q9D1C2 127 aa8.3□□□□□ -1.08
Hmgb1-208ENSMUST00000139443 Acyp1P56376 99 aa8.29□□□□□ -1.08
Hmgb1-208ENSMUST00000139443 Defa21Q8C1P2 93 aa8.28□□□□□ -1.08
Hmgb1-208ENSMUST00000139443 2310034C09RikQ9D746 214 aa8.28□□□□□ -1.08
Hmgb1-208ENSMUST00000139443 Igkv3-3A0A140T8Q0 119 aa8.27□□□□□ -1.09
Hmgb1-208ENSMUST00000139443 Sprr2jO70561 109 aa8.27□□□□□ -1.09
Hmgb1-208ENSMUST00000139443 Trav14d-3-dv8A0A075B619 120 aa8.26□□□□□ -1.09
Hmgb1-208ENSMUST00000139443 Gm19402J3QJV4 266 aa8.26□□□□□ -1.09
Hmgb1-208ENSMUST00000139443 C130032M10RikQ8C888 123 aa8.26□□□□□ -1.09
Hmgb1-208ENSMUST00000139443 Rnf213E9Q555 5152 aaKnown RBP8.25□□□□□ -1.09
Hmgb1-208ENSMUST00000139443 Ube2v1Q9CZY3 147 aa8.25□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 49.8 ms