Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Gm25239-201ENSMUST00000174915 86 ntBASIC20.57■□□□□ 0.88
Rnf213E9Q555 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf213E9Q555 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf213E9Q555 Gm24109-201ENSMUST00000175489 103 ntBASIC18.06■□□□□ 0.48
Rnf213E9Q555 Gm15042-201ENSMUST00000120212 883 ntBASIC17.51■□□□□ 0.39
Rnf213E9Q555 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf213E9Q555 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf213E9Q555 Gm15045-201ENSMUST00000117359 883 ntBASIC17.09■□□□□ 0.33
Rnf213E9Q555 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf213E9Q555 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf213E9Q555 Gm23366-201ENSMUST00000175022 89 ntBASIC16.96■□□□□ 0.3
Rnf213E9Q555 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf213E9Q555 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC16.83■□□□□ 0.29
Rnf213E9Q555 AC153911.1-202ENSMUST00000218534 1034 ntBASIC16.81■□□□□ 0.28
Rnf213E9Q555 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Rnf213E9Q555 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf213E9Q555 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf213E9Q555 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf213E9Q555 Gm25238-201ENSMUST00000174914 89 ntBASIC16.3■□□□□ 0.2
Rnf213E9Q555 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC16.3■□□□□ 0.2
Rnf213E9Q555 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf213E9Q555 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rnf213E9Q555 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Rnf213E9Q555 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Rnf213E9Q555 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf213E9Q555 Gm25262-201ENSMUST00000174934 133 ntBASIC15.83■□□□□ 0.12
Rnf213E9Q555 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rnf213E9Q555 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC15.68■□□□□ 0.1
Rnf213E9Q555 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC15.66■□□□□ 0.1
Rnf213E9Q555 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
Rnf213E9Q555 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC15.59■□□□□ 0.09
Rnf213E9Q555 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC15.55■□□□□ 0.08
Rnf213E9Q555 Gm26115-201ENSMUST00000175605 87 ntBASIC15.54■□□□□ 0.08
Rnf213E9Q555 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf213E9Q555 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf213E9Q555 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC15.45■□□□□ 0.06
Rnf213E9Q555 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf213E9Q555 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf213E9Q555 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf213E9Q555 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf213E9Q555 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf213E9Q555 Gm8109-201ENSMUST00000194076 746 ntBASIC15.3■□□□□ 0.04
Rnf213E9Q555 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC15.28■□□□□ 0.04
Rnf213E9Q555 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf213E9Q555 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf213E9Q555 Rab21-202ENSMUST00000218831 843 ntBASIC15.27■□□□□ 0.04
Rnf213E9Q555 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf213E9Q555 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf213E9Q555 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC15.2■□□□□ 0.02
Rnf213E9Q555 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf213E9Q555 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC15.19■□□□□ 0.02
Rnf213E9Q555 Gm27325-201ENSMUST00000175467 74 ntBASIC15.18■□□□□ 0.02
Rnf213E9Q555 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf213E9Q555 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC15.1■□□□□ 0.01
Rnf213E9Q555 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC15.08■□□□□ 0
Rnf213E9Q555 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf213E9Q555 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rnf213E9Q555 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC14.99□□□□□ -0.01
Rnf213E9Q555 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf213E9Q555 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Rnf213E9Q555 Gm24804-201ENSMUST00000174982 85 ntBASIC14.96□□□□□ -0.02
Rnf213E9Q555 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf213E9Q555 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf213E9Q555 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf213E9Q555 Gm17082-201ENSMUST00000166043 1091 ntBASIC14.88□□□□□ -0.03
Rnf213E9Q555 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf213E9Q555 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf213E9Q555 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf213E9Q555 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf213E9Q555 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC14.77□□□□□ -0.05
Rnf213E9Q555 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf213E9Q555 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC14.74□□□□□ -0.05
Rnf213E9Q555 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC14.73□□□□□ -0.05
Rnf213E9Q555 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf213E9Q555 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf213E9Q555 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC14.66□□□□□ -0.06
Rnf213E9Q555 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rnf213E9Q555 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf213E9Q555 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf213E9Q555 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC14.59□□□□□ -0.07
Rnf213E9Q555 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf213E9Q555 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC14.57□□□□□ -0.08
Rnf213E9Q555 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Rnf213E9Q555 Zfp131-205ENSMUST00000223812 663 ntBASIC14.56□□□□□ -0.08
Rnf213E9Q555 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC14.56□□□□□ -0.08
Rnf213E9Q555 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf213E9Q555 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf213E9Q555 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf213E9Q555 Gm27322-201ENSMUST00000184007 104 ntBASIC14.53□□□□□ -0.08
Rnf213E9Q555 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf213E9Q555 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf213E9Q555 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf213E9Q555 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf213E9Q555 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC14.49□□□□□ -0.09
Rnf213E9Q555 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC14.48□□□□□ -0.09
Rnf213E9Q555 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf213E9Q555 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.44□□□□□ -0.1
Rnf213E9Q555 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf213E9Q555 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf213E9Q555 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms