Protein–RNA interactions for Protein: A0A0B4J1J6

Ighv10-1, Immunoglobulin heavy variable 10-1 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv10-1A0A0B4J1J6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ighv10-1A0A0B4J1J6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Ighv10-1A0A0B4J1J6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ighv10-1A0A0B4J1J6 Psd-208ENSMUST00000224556 2034 ntBASIC20.88■□□□□ 0.93
Ighv10-1A0A0B4J1J6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ighv10-1A0A0B4J1J6 Gm25239-201ENSMUST00000174915 86 ntBASIC20.78■□□□□ 0.92
Ighv10-1A0A0B4J1J6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ighv10-1A0A0B4J1J6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ighv10-1A0A0B4J1J6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ighv10-1A0A0B4J1J6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv10-1A0A0B4J1J6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ighv10-1A0A0B4J1J6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ighv10-1A0A0B4J1J6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv10-1A0A0B4J1J6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv10-1A0A0B4J1J6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ighv10-1A0A0B4J1J6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv10-1A0A0B4J1J6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv10-1A0A0B4J1J6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.4■□□□□ 0.7
Ighv10-1A0A0B4J1J6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ighv10-1A0A0B4J1J6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv10-1A0A0B4J1J6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv10-1A0A0B4J1J6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv10-1A0A0B4J1J6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv10-1A0A0B4J1J6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ighv10-1A0A0B4J1J6 Gm15042-201ENSMUST00000120212 883 ntBASIC19.02■□□□□ 0.64
Ighv10-1A0A0B4J1J6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19■□□□□ 0.63
Ighv10-1A0A0B4J1J6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Ighv10-1A0A0B4J1J6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv10-1A0A0B4J1J6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv10-1A0A0B4J1J6 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.84■□□□□ 0.61
Ighv10-1A0A0B4J1J6 Gm10524-201ENSMUST00000181931 1893 ntBASIC18.8■□□□□ 0.6
Ighv10-1A0A0B4J1J6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.79■□□□□ 0.6
Ighv10-1A0A0B4J1J6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv10-1A0A0B4J1J6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv10-1A0A0B4J1J6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.76■□□□□ 0.59
Ighv10-1A0A0B4J1J6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv10-1A0A0B4J1J6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.75■□□□□ 0.59
Ighv10-1A0A0B4J1J6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv10-1A0A0B4J1J6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv10-1A0A0B4J1J6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv10-1A0A0B4J1J6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv10-1A0A0B4J1J6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv10-1A0A0B4J1J6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv10-1A0A0B4J1J6 Gm15045-201ENSMUST00000117359 883 ntBASIC18.68■□□□□ 0.58
Ighv10-1A0A0B4J1J6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv10-1A0A0B4J1J6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv10-1A0A0B4J1J6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv10-1A0A0B4J1J6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ighv10-1A0A0B4J1J6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv10-1A0A0B4J1J6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv10-1A0A0B4J1J6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.52■□□□□ 0.56
Ighv10-1A0A0B4J1J6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv10-1A0A0B4J1J6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv10-1A0A0B4J1J6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv10-1A0A0B4J1J6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv10-1A0A0B4J1J6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ighv10-1A0A0B4J1J6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv10-1A0A0B4J1J6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv10-1A0A0B4J1J6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv10-1A0A0B4J1J6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv10-1A0A0B4J1J6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ighv10-1A0A0B4J1J6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv10-1A0A0B4J1J6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv10-1A0A0B4J1J6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv10-1A0A0B4J1J6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv10-1A0A0B4J1J6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ighv10-1A0A0B4J1J6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.1■□□□□ 0.49
Ighv10-1A0A0B4J1J6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv10-1A0A0B4J1J6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv10-1A0A0B4J1J6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv10-1A0A0B4J1J6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ighv10-1A0A0B4J1J6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv10-1A0A0B4J1J6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv10-1A0A0B4J1J6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv10-1A0A0B4J1J6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv10-1A0A0B4J1J6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ighv10-1A0A0B4J1J6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ighv10-1A0A0B4J1J6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC17.88■□□□□ 0.45
Ighv10-1A0A0B4J1J6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv10-1A0A0B4J1J6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv10-1A0A0B4J1J6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv10-1A0A0B4J1J6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv10-1A0A0B4J1J6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv10-1A0A0B4J1J6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv10-1A0A0B4J1J6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv10-1A0A0B4J1J6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv10-1A0A0B4J1J6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ighv10-1A0A0B4J1J6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv10-1A0A0B4J1J6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv10-1A0A0B4J1J6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ighv10-1A0A0B4J1J6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv10-1A0A0B4J1J6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv10-1A0A0B4J1J6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv10-1A0A0B4J1J6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv10-1A0A0B4J1J6 Gm24109-201ENSMUST00000175489 103 ntBASIC17.62■□□□□ 0.41
Ighv10-1A0A0B4J1J6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv10-1A0A0B4J1J6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv10-1A0A0B4J1J6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.56■□□□□ 0.4
Ighv10-1A0A0B4J1J6 Gm23366-201ENSMUST00000175022 89 ntBASIC17.54■□□□□ 0.4
Ighv10-1A0A0B4J1J6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms