Protein–RNA interactions for Protein: Q8C5X9

Gm5142, Predicted gene 5142, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5142Q8C5X9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gm5142Q8C5X9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Gm5142Q8C5X9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm5142Q8C5X9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm5142Q8C5X9 Psd-208ENSMUST00000224556 2034 ntBASIC21.22■□□□□ 0.99
Gm5142Q8C5X9 Gm25239-201ENSMUST00000174915 86 ntBASIC21■□□□□ 0.95
Gm5142Q8C5X9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm5142Q8C5X9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm5142Q8C5X9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm5142Q8C5X9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5142Q8C5X9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5142Q8C5X9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5142Q8C5X9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm5142Q8C5X9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm5142Q8C5X9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm5142Q8C5X9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm5142Q8C5X9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Gm5142Q8C5X9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm5142Q8C5X9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.63■□□□□ 0.73
Gm5142Q8C5X9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm5142Q8C5X9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm5142Q8C5X9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm5142Q8C5X9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5142Q8C5X9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5142Q8C5X9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.26■□□□□ 0.67
Gm5142Q8C5X9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm5142Q8C5X9 Gm15042-201ENSMUST00000120212 883 ntBASIC19.17■□□□□ 0.66
Gm5142Q8C5X9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.16■□□□□ 0.66
Gm5142Q8C5X9 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.15■□□□□ 0.66
Gm5142Q8C5X9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5142Q8C5X9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5142Q8C5X9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Gm5142Q8C5X9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm5142Q8C5X9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm5142Q8C5X9 Gm10524-201ENSMUST00000181931 1893 ntBASIC18.99■□□□□ 0.63
Gm5142Q8C5X9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm5142Q8C5X9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.97■□□□□ 0.63
Gm5142Q8C5X9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm5142Q8C5X9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm5142Q8C5X9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.94■□□□□ 0.62
Gm5142Q8C5X9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm5142Q8C5X9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5142Q8C5X9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5142Q8C5X9 Gm15045-201ENSMUST00000117359 883 ntBASIC18.87■□□□□ 0.61
Gm5142Q8C5X9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5142Q8C5X9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5142Q8C5X9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Gm5142Q8C5X9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5142Q8C5X9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm5142Q8C5X9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm5142Q8C5X9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.65■□□□□ 0.58
Gm5142Q8C5X9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm5142Q8C5X9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5142Q8C5X9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm5142Q8C5X9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5142Q8C5X9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Gm5142Q8C5X9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Gm5142Q8C5X9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Gm5142Q8C5X9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm5142Q8C5X9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm5142Q8C5X9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm5142Q8C5X9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5142Q8C5X9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Gm5142Q8C5X9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5142Q8C5X9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5142Q8C5X9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5142Q8C5X9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5142Q8C5X9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Gm5142Q8C5X9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.3■□□□□ 0.52
Gm5142Q8C5X9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5142Q8C5X9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm5142Q8C5X9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm5142Q8C5X9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5142Q8C5X9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gm5142Q8C5X9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5142Q8C5X9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5142Q8C5X9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.13■□□□□ 0.49
Gm5142Q8C5X9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5142Q8C5X9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5142Q8C5X9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm5142Q8C5X9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5142Q8C5X9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm5142Q8C5X9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.98■□□□□ 0.47
Gm5142Q8C5X9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm5142Q8C5X9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Gm5142Q8C5X9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm5142Q8C5X9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gm5142Q8C5X9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm5142Q8C5X9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm5142Q8C5X9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm5142Q8C5X9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm5142Q8C5X9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm5142Q8C5X9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.9■□□□□ 0.46
Gm5142Q8C5X9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm5142Q8C5X9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Gm5142Q8C5X9 Gm24109-201ENSMUST00000175489 103 ntBASIC17.81■□□□□ 0.44
Gm5142Q8C5X9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5142Q8C5X9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Gm5142Q8C5X9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5142Q8C5X9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms