Protein–RNA interactions for Protein: E9Q942

Smim13, Small integral membrane protein 13, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim13E9Q942 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Smim13E9Q942 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Smim13E9Q942 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Smim13E9Q942 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Smim13E9Q942 Psd-208ENSMUST00000224556 2034 ntBASIC23.01■■□□□ 1.27
Smim13E9Q942 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Smim13E9Q942 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
Smim13E9Q942 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Smim13E9Q942 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Smim13E9Q942 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Smim13E9Q942 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Smim13E9Q942 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smim13E9Q942 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smim13E9Q942 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smim13E9Q942 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Smim13E9Q942 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smim13E9Q942 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smim13E9Q942 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smim13E9Q942 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smim13E9Q942 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smim13E9Q942 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Smim13E9Q942 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smim13E9Q942 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Smim13E9Q942 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smim13E9Q942 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.28■■□□□ 1
Smim13E9Q942 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smim13E9Q942 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smim13E9Q942 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.02■□□□□ 0.95
Smim13E9Q942 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smim13E9Q942 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smim13E9Q942 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Smim13E9Q942 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smim13E9Q942 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smim13E9Q942 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smim13E9Q942 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.65■□□□□ 0.9
Smim13E9Q942 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smim13E9Q942 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Smim13E9Q942 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Smim13E9Q942 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Smim13E9Q942 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smim13E9Q942 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smim13E9Q942 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Smim13E9Q942 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smim13E9Q942 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smim13E9Q942 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smim13E9Q942 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smim13E9Q942 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smim13E9Q942 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.32■□□□□ 0.84
Smim13E9Q942 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.28■□□□□ 0.84
Smim13E9Q942 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smim13E9Q942 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smim13E9Q942 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.25■□□□□ 0.83
Smim13E9Q942 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.21■□□□□ 0.83
Smim13E9Q942 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smim13E9Q942 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.14■□□□□ 0.81
Smim13E9Q942 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smim13E9Q942 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smim13E9Q942 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smim13E9Q942 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smim13E9Q942 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smim13E9Q942 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.02■□□□□ 0.8
Smim13E9Q942 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smim13E9Q942 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smim13E9Q942 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smim13E9Q942 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Smim13E9Q942 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smim13E9Q942 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smim13E9Q942 Zxda-201ENSMUST00000117281 2621 ntBASIC19.91■□□□□ 0.78
Smim13E9Q942 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Smim13E9Q942 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smim13E9Q942 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smim13E9Q942 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smim13E9Q942 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Smim13E9Q942 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Smim13E9Q942 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smim13E9Q942 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smim13E9Q942 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim13E9Q942 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smim13E9Q942 Gm25239-201ENSMUST00000174915 86 ntBASIC19.72■□□□□ 0.75
Smim13E9Q942 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smim13E9Q942 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Smim13E9Q942 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Smim13E9Q942 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smim13E9Q942 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smim13E9Q942 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smim13E9Q942 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smim13E9Q942 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.6■□□□□ 0.73
Smim13E9Q942 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smim13E9Q942 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smim13E9Q942 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smim13E9Q942 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim13E9Q942 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smim13E9Q942 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.52■□□□□ 0.72
Smim13E9Q942 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Smim13E9Q942 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim13E9Q942 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smim13E9Q942 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smim13E9Q942 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smim13E9Q942 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smim13E9Q942 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms