Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Igkv8-28A0A0G2JE47 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Igkv8-28A0A0G2JE47 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv8-28A0A0G2JE47 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv8-28A0A0G2JE47 Gm25239-201ENSMUST00000174915 86 ntBASIC20.31■□□□□ 0.84
Igkv8-28A0A0G2JE47 Psd-208ENSMUST00000224556 2034 ntBASIC20.21■□□□□ 0.83
Igkv8-28A0A0G2JE47 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igkv8-28A0A0G2JE47 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv8-28A0A0G2JE47 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv8-28A0A0G2JE47 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv8-28A0A0G2JE47 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv8-28A0A0G2JE47 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv8-28A0A0G2JE47 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv8-28A0A0G2JE47 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv8-28A0A0G2JE47 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Igkv8-28A0A0G2JE47 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Igkv8-28A0A0G2JE47 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Igkv8-28A0A0G2JE47 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv8-28A0A0G2JE47 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Igkv8-28A0A0G2JE47 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv8-28A0A0G2JE47 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18.55■□□□□ 0.56
Igkv8-28A0A0G2JE47 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv8-28A0A0G2JE47 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv8-28A0A0G2JE47 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv8-28A0A0G2JE47 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv8-28A0A0G2JE47 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv8-28A0A0G2JE47 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv8-28A0A0G2JE47 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv8-28A0A0G2JE47 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv8-28A0A0G2JE47 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv8-28A0A0G2JE47 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.3■□□□□ 0.52
Igkv8-28A0A0G2JE47 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18.3■□□□□ 0.52
Igkv8-28A0A0G2JE47 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv8-28A0A0G2JE47 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.26■□□□□ 0.51
Igkv8-28A0A0G2JE47 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv8-28A0A0G2JE47 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igkv8-28A0A0G2JE47 Gm15042-201ENSMUST00000120212 883 ntBASIC18.13■□□□□ 0.49
Igkv8-28A0A0G2JE47 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv8-28A0A0G2JE47 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv8-28A0A0G2JE47 Gm10524-201ENSMUST00000181931 1893 ntBASIC18■□□□□ 0.47
Igkv8-28A0A0G2JE47 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv8-28A0A0G2JE47 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Igkv8-28A0A0G2JE47 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv8-28A0A0G2JE47 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC17.93■□□□□ 0.46
Igkv8-28A0A0G2JE47 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv8-28A0A0G2JE47 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv8-28A0A0G2JE47 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC17.88■□□□□ 0.45
Igkv8-28A0A0G2JE47 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv8-28A0A0G2JE47 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv8-28A0A0G2JE47 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv8-28A0A0G2JE47 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv8-28A0A0G2JE47 Gm15045-201ENSMUST00000117359 883 ntBASIC17.73■□□□□ 0.43
Igkv8-28A0A0G2JE47 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Igkv8-28A0A0G2JE47 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv8-28A0A0G2JE47 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv8-28A0A0G2JE47 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv8-28A0A0G2JE47 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17.62■□□□□ 0.41
Igkv8-28A0A0G2JE47 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Igkv8-28A0A0G2JE47 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Igkv8-28A0A0G2JE47 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv8-28A0A0G2JE47 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Igkv8-28A0A0G2JE47 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Igkv8-28A0A0G2JE47 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv8-28A0A0G2JE47 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv8-28A0A0G2JE47 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv8-28A0A0G2JE47 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv8-28A0A0G2JE47 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv8-28A0A0G2JE47 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv8-28A0A0G2JE47 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv8-28A0A0G2JE47 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv8-28A0A0G2JE47 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv8-28A0A0G2JE47 Gm24109-201ENSMUST00000175489 103 ntBASIC17.41■□□□□ 0.38
Igkv8-28A0A0G2JE47 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv8-28A0A0G2JE47 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Igkv8-28A0A0G2JE47 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv8-28A0A0G2JE47 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv8-28A0A0G2JE47 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv8-28A0A0G2JE47 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17.32■□□□□ 0.36
Igkv8-28A0A0G2JE47 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv8-28A0A0G2JE47 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC17.31■□□□□ 0.36
Igkv8-28A0A0G2JE47 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Igkv8-28A0A0G2JE47 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.23■□□□□ 0.35
Igkv8-28A0A0G2JE47 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv8-28A0A0G2JE47 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv8-28A0A0G2JE47 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv8-28A0A0G2JE47 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv8-28A0A0G2JE47 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv8-28A0A0G2JE47 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv8-28A0A0G2JE47 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.16■□□□□ 0.34
Igkv8-28A0A0G2JE47 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv8-28A0A0G2JE47 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv8-28A0A0G2JE47 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv8-28A0A0G2JE47 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv8-28A0A0G2JE47 Gm23366-201ENSMUST00000175022 89 ntBASIC17.1■□□□□ 0.33
Igkv8-28A0A0G2JE47 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Igkv8-28A0A0G2JE47 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv8-28A0A0G2JE47 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igkv8-28A0A0G2JE47 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv8-28A0A0G2JE47 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv8-28A0A0G2JE47 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms