Protein–RNA interactions for Protein: A0A1B0GQX3

Ctxnd2, Cortexin domain containing 2, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctxnd2A0A1B0GQX3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ctxnd2A0A1B0GQX3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ctxnd2A0A1B0GQX3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ctxnd2A0A1B0GQX3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Ctxnd2A0A1B0GQX3 Psd-208ENSMUST00000224556 2034 ntBASIC25.2■■□□□ 1.62
Ctxnd2A0A1B0GQX3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ctxnd2A0A1B0GQX3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ctxnd2A0A1B0GQX3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ctxnd2A0A1B0GQX3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Ctxnd2A0A1B0GQX3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ctxnd2A0A1B0GQX3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Ctxnd2A0A1B0GQX3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ctxnd2A0A1B0GQX3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ctxnd2A0A1B0GQX3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ctxnd2A0A1B0GQX3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ctxnd2A0A1B0GQX3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ctxnd2A0A1B0GQX3 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.52■■□□□ 1.36
Ctxnd2A0A1B0GQX3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ctxnd2A0A1B0GQX3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ctxnd2A0A1B0GQX3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ctxnd2A0A1B0GQX3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ctxnd2A0A1B0GQX3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ctxnd2A0A1B0GQX3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ctxnd2A0A1B0GQX3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Ctxnd2A0A1B0GQX3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
Ctxnd2A0A1B0GQX3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ctxnd2A0A1B0GQX3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.12■■□□□ 1.29
Ctxnd2A0A1B0GQX3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ctxnd2A0A1B0GQX3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Ctxnd2A0A1B0GQX3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ctxnd2A0A1B0GQX3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ctxnd2A0A1B0GQX3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ctxnd2A0A1B0GQX3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ctxnd2A0A1B0GQX3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ctxnd2A0A1B0GQX3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ctxnd2A0A1B0GQX3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.59■■□□□ 1.21
Ctxnd2A0A1B0GQX3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.56■■□□□ 1.2
Ctxnd2A0A1B0GQX3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ctxnd2A0A1B0GQX3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Ctxnd2A0A1B0GQX3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ctxnd2A0A1B0GQX3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Ctxnd2A0A1B0GQX3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.44■■□□□ 1.18
Ctxnd2A0A1B0GQX3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ctxnd2A0A1B0GQX3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ctxnd2A0A1B0GQX3 Zxda-201ENSMUST00000117281 2621 ntBASIC22.4■■□□□ 1.18
Ctxnd2A0A1B0GQX3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ctxnd2A0A1B0GQX3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ctxnd2A0A1B0GQX3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ctxnd2A0A1B0GQX3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ctxnd2A0A1B0GQX3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ctxnd2A0A1B0GQX3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ctxnd2A0A1B0GQX3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ctxnd2A0A1B0GQX3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ctxnd2A0A1B0GQX3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.04■■□□□ 1.12
Ctxnd2A0A1B0GQX3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ctxnd2A0A1B0GQX3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ctxnd2A0A1B0GQX3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.95■■□□□ 1.11
Ctxnd2A0A1B0GQX3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ctxnd2A0A1B0GQX3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ctxnd2A0A1B0GQX3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ctxnd2A0A1B0GQX3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Ctxnd2A0A1B0GQX3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ctxnd2A0A1B0GQX3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ctxnd2A0A1B0GQX3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ctxnd2A0A1B0GQX3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Ctxnd2A0A1B0GQX3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ctxnd2A0A1B0GQX3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ctxnd2A0A1B0GQX3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Ctxnd2A0A1B0GQX3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ctxnd2A0A1B0GQX3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ctxnd2A0A1B0GQX3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ctxnd2A0A1B0GQX3 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.71■■□□□ 1.07
Ctxnd2A0A1B0GQX3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ctxnd2A0A1B0GQX3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ctxnd2A0A1B0GQX3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ctxnd2A0A1B0GQX3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ctxnd2A0A1B0GQX3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Ctxnd2A0A1B0GQX3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.55■■□□□ 1.04
Ctxnd2A0A1B0GQX3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ctxnd2A0A1B0GQX3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ctxnd2A0A1B0GQX3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.53■■□□□ 1.04
Ctxnd2A0A1B0GQX3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ctxnd2A0A1B0GQX3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ctxnd2A0A1B0GQX3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ctxnd2A0A1B0GQX3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ctxnd2A0A1B0GQX3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ctxnd2A0A1B0GQX3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ctxnd2A0A1B0GQX3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ctxnd2A0A1B0GQX3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ctxnd2A0A1B0GQX3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ctxnd2A0A1B0GQX3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ctxnd2A0A1B0GQX3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ctxnd2A0A1B0GQX3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ctxnd2A0A1B0GQX3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.33■■□□□ 1.01
Ctxnd2A0A1B0GQX3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ctxnd2A0A1B0GQX3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ctxnd2A0A1B0GQX3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ctxnd2A0A1B0GQX3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ctxnd2A0A1B0GQX3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ctxnd2A0A1B0GQX3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms