Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Vamp8O70404 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Vamp8O70404 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Vamp8O70404 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Vamp8O70404 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Vamp8O70404 Psd-208ENSMUST00000224556 2034 ntBASIC22.82■■□□□ 1.24
Vamp8O70404 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Vamp8O70404 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vamp8O70404 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vamp8O70404 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vamp8O70404 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vamp8O70404 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vamp8O70404 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vamp8O70404 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Vamp8O70404 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vamp8O70404 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Vamp8O70404 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vamp8O70404 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vamp8O70404 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vamp8O70404 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vamp8O70404 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Vamp8O70404 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vamp8O70404 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.94■□□□□ 0.94
Vamp8O70404 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vamp8O70404 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vamp8O70404 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vamp8O70404 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vamp8O70404 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.64■□□□□ 0.89
Vamp8O70404 Gm25239-201ENSMUST00000174915 86 ntBASIC20.63■□□□□ 0.89
Vamp8O70404 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vamp8O70404 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.56■□□□□ 0.88
Vamp8O70404 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vamp8O70404 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vamp8O70404 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vamp8O70404 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vamp8O70404 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.45■□□□□ 0.86
Vamp8O70404 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vamp8O70404 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Vamp8O70404 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vamp8O70404 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp8O70404 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vamp8O70404 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Vamp8O70404 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.2■□□□□ 0.82
Vamp8O70404 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Vamp8O70404 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vamp8O70404 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vamp8O70404 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Vamp8O70404 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vamp8O70404 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vamp8O70404 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vamp8O70404 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.93■□□□□ 0.78
Vamp8O70404 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vamp8O70404 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Vamp8O70404 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.83■□□□□ 0.77
Vamp8O70404 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vamp8O70404 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vamp8O70404 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.77■□□□□ 0.76
Vamp8O70404 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vamp8O70404 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp8O70404 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp8O70404 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp8O70404 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vamp8O70404 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Vamp8O70404 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vamp8O70404 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.69■□□□□ 0.74
Vamp8O70404 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vamp8O70404 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vamp8O70404 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.67■□□□□ 0.74
Vamp8O70404 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Vamp8O70404 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vamp8O70404 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.64■□□□□ 0.73
Vamp8O70404 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vamp8O70404 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vamp8O70404 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vamp8O70404 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp8O70404 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.56■□□□□ 0.72
Vamp8O70404 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vamp8O70404 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vamp8O70404 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vamp8O70404 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vamp8O70404 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vamp8O70404 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vamp8O70404 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vamp8O70404 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vamp8O70404 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vamp8O70404 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp8O70404 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Vamp8O70404 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Vamp8O70404 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Vamp8O70404 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vamp8O70404 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vamp8O70404 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vamp8O70404 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vamp8O70404 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vamp8O70404 Gm15042-201ENSMUST00000120212 883 ntBASIC19.26■□□□□ 0.67
Vamp8O70404 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vamp8O70404 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.25■□□□□ 0.67
Vamp8O70404 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vamp8O70404 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Vamp8O70404 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms