RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Gm7276Q3TYW4 209 aa12.65□□□□□ -0.38
Ssbp4-201ENSMUST00000049908 Ube2aQ9Z255 152 aa12.65□□□□□ -0.38
Ssbp4-201ENSMUST00000049908 Lrp2A2ARV4 4660 aa12.65□□□□□ -0.38
Ssbp4-201ENSMUST00000049908 Gm27235Q3UW50 83 aa12.65□□□□□ -0.38
Ssbp4-201ENSMUST00000049908 Smim26Q3V460 107 aa12.65□□□□□ -0.38
Ssbp4-201ENSMUST00000049908 TeppQ6IMH0 216 aa12.65□□□□□ -0.38
Ssbp4-201ENSMUST00000049908 E130218I03RikA0A0U1RNU5 63 aa12.64□□□□□ -0.39
Ssbp4-201ENSMUST00000049908 A530084C06RikQ3UTW2 186 aa12.64□□□□□ -0.39
Ssbp4-201ENSMUST00000049908 Phpt1Q9DAK9 124 aa12.64□□□□□ -0.39
Ssbp4-201ENSMUST00000049908 Msrb1Q9JLC3 116 aa12.64□□□□□ -0.39
Ssbp4-201ENSMUST00000049908 Defb29Q8BGW9 78 aa12.63□□□□□ -0.39
Ssbp4-201ENSMUST00000049908 CenpwQ3URR0 86 aa12.62□□□□□ -0.39
Ssbp4-201ENSMUST00000049908 5730596B20RikQ8BQ08 205 aa12.62□□□□□ -0.39
Ssbp4-201ENSMUST00000049908 Cox6cQ9CPQ1 76 aa12.62□□□□□ -0.39
Ssbp4-201ENSMUST00000049908 Igkv3-7A0A0G2JE31 119 aa12.61□□□□□ -0.39
Ssbp4-201ENSMUST00000049908 Elof1P60003 83 aa12.61□□□□□ -0.39
Ssbp4-201ENSMUST00000049908 AI606181Q8C7B9 129 aa12.61□□□□□ -0.39
Ssbp4-201ENSMUST00000049908 Gm10135F6TEE5 83 aa12.59□□□□□ -0.39
Ssbp4-201ENSMUST00000049908 Ccdc179J3QM76 67 aa12.59□□□□□ -0.39
Ssbp4-201ENSMUST00000049908 Xlr5cQ9JJR2 179 aa12.59□□□□□ -0.39
Ssbp4-201ENSMUST00000049908 Igkv4-58A0A0G2JGI6 119 aa12.58□□□□□ -0.4
Ssbp4-201ENSMUST00000049908 Gm20726G3UX18 150 aa12.57□□□□□ -0.4
Ssbp4-201ENSMUST00000049908 Defb47Q30KN1 79 aa12.56□□□□□ -0.4
Ssbp4-201ENSMUST00000049908 Defb39Q70KL3 74 aa12.56□□□□□ -0.4
Ssbp4-201ENSMUST00000049908 Igkv1-110A0A0B4J1I0 119 aa12.55□□□□□ -0.4
Ssbp4-201ENSMUST00000049908 Gm10320E9PW43 113 aa12.55□□□□□ -0.4
Ssbp4-201ENSMUST00000049908 Cdip1Q9DB75 208 aa12.55□□□□□ -0.4
Ssbp4-201ENSMUST00000049908 Ighv10-1A0A0B4J1J6 119 aa12.54□□□□□ -0.4
Ssbp4-201ENSMUST00000049908 Gm29423A0A087WRM1 55 aa12.52□□□□□ -0.41
Ssbp4-201ENSMUST00000049908 Gm10139O88245 57 aa12.52□□□□□ -0.41
Ssbp4-201ENSMUST00000049908 Gm16381A0A1Y7VKT9 73 aa12.51□□□□□ -0.41
Ssbp4-201ENSMUST00000049908 Trav3-4A0A075B654 114 aa12.5□□□□□ -0.41
Ssbp4-201ENSMUST00000049908 Igkv1-122A0A140T8M9 119 aa12.5□□□□□ -0.41
Ssbp4-201ENSMUST00000049908 A930002H24RikQ8C8Y3 163 aa12.49□□□□□ -0.41
Ssbp4-201ENSMUST00000049908 Tmem213Q08EA8 116 aa12.48□□□□□ -0.41
Ssbp4-201ENSMUST00000049908 Rpl39lQ9CQD0 51 aa12.48□□□□□ -0.41
Ssbp4-201ENSMUST00000049908 Defa28D3Z1V9 94 aa12.46□□□□□ -0.41
Ssbp4-201ENSMUST00000049908 Bean1Q9EQG5 255 aa12.46□□□□□ -0.41
Ssbp4-201ENSMUST00000049908 Igkv1-35A0A0G2JDE5 120 aa12.45□□□□□ -0.42
Ssbp4-201ENSMUST00000049908 Lyrm7Q9DA03 104 aa12.45□□□□□ -0.42
Ssbp4-201ENSMUST00000049908 Igkv8-26A0A075B5N5 123 aa12.44□□□□□ -0.42
Ssbp4-201ENSMUST00000049908 Tmem243B2RVB9 118 aa12.44□□□□□ -0.42
Ssbp4-201ENSMUST00000049908 Odf3bQ5M8M2 238 aa12.44□□□□□ -0.42
Ssbp4-201ENSMUST00000049908 Defb37Q7TMD2 62 aa12.44□□□□□ -0.42
Ssbp4-201ENSMUST00000049908 Igkv3-5A0A140T8M6 119 aa12.43□□□□□ -0.42
Ssbp4-201ENSMUST00000049908 Gm10767Q3TQP0 103 aa12.43□□□□□ -0.42
Ssbp4-201ENSMUST00000049908 Acyp1P56376 99 aa12.42□□□□□ -0.42
Ssbp4-201ENSMUST00000049908 Znf706Q9D115 76 aaKnown RBP12.41□□□□□ -0.42
Ssbp4-201ENSMUST00000049908 Wfdc13Q5DQQ6 81 aa12.4□□□□□ -0.42
Ssbp4-201ENSMUST00000049908 Defb12Q8K4N3 78 aa12.4□□□□□ -0.42
Ssbp4-201ENSMUST00000049908 Gm9736A0A1W2P7N1 277 aa12.4□□□□□ -0.43
Ssbp4-201ENSMUST00000049908 1700020N15RikL7MTX3 112 aa12.39□□□□□ -0.43
Ssbp4-201ENSMUST00000049908 Anapc11Q9CPX9 84 aa12.37□□□□□ -0.43
Ssbp4-201ENSMUST00000049908 BatfO35284 125 aa12.36□□□□□ -0.43
Ssbp4-201ENSMUST00000049908 A0A286YE02 88 aa12.35□□□□□ -0.43
Ssbp4-201ENSMUST00000049908 Vpreb3D3Z6J4 130 aa12.35□□□□□ -0.43
Ssbp4-201ENSMUST00000049908 Prm1P02319 51 aa12.35□□□□□ -0.43
Ssbp4-201ENSMUST00000049908 4930524J08RikQ9CUJ5 163 aa12.33□□□□□ -0.44
Ssbp4-201ENSMUST00000049908 Igkv2-109A0A075B5K6 120 aa12.31□□□□□ -0.44
Ssbp4-201ENSMUST00000049908 Atp5eP56382 52 aa12.31□□□□□ -0.44
Ssbp4-201ENSMUST00000049908 Vpreb1P13372 142 aa12.3□□□□□ -0.44
Ssbp4-201ENSMUST00000049908 A930033H14RikG5E8X6 103 aa12.28□□□□□ -0.44
Ssbp4-201ENSMUST00000049908 Gm28230A0A0A0MQ91 144 aa12.27□□□□□ -0.44
Ssbp4-201ENSMUST00000049908 Gm7735D3YX18 52 aa12.27□□□□□ -0.45
Ssbp4-201ENSMUST00000049908 Cypt14J3QPF7 87 aa12.26□□□□□ -0.45
Ssbp4-201ENSMUST00000049908 Ush2AQ2QI47 5193 aa12.24□□□□□ -0.45
Ssbp4-201ENSMUST00000049908 Gm10401E9Q3K6 71 aa12.23□□□□□ -0.45
Ssbp4-201ENSMUST00000049908 A830005F24RikQ8BRT5 167 aa12.23□□□□□ -0.45
Ssbp4-201ENSMUST00000049908 Gm37389A0A0A6YW05 95 aa12.22□□□□□ -0.45
Ssbp4-201ENSMUST00000049908 Lamtor3O88653 124 aa12.21□□□□□ -0.45
Ssbp4-201ENSMUST00000049908 Xcl1P47993 114 aa12.21□□□□□ -0.45
Ssbp4-201ENSMUST00000049908 Defa25Q5G864 92 aa12.21□□□□□ -0.45
Ssbp4-201ENSMUST00000049908 Anapc13Q8R034 74 aa12.21□□□□□ -0.45
Ssbp4-201ENSMUST00000049908 9530003J23RikQ8BM26 151 aa12.21□□□□□ -0.46
Ssbp4-201ENSMUST00000049908 Gm9789Q8BIG3 52 aa12.18□□□□□ -0.46
Ssbp4-201ENSMUST00000049908 P06320 134 aa12.15□□□□□ -0.46
Ssbp4-201ENSMUST00000049908 Igkv3-10A0A0G2JGN0 119 aa12.14□□□□□ -0.47
Ssbp4-201ENSMUST00000049908 Gm17689B3GLJ4 109 aa12.14□□□□□ -0.47
Ssbp4-201ENSMUST00000049908 GhrhP16043 103 aa12.14□□□□□ -0.47
Ssbp4-201ENSMUST00000049908 Trav14d-3-dv8A0A075B619 120 aa12.13□□□□□ -0.47
Ssbp4-201ENSMUST00000049908 Sfta2E9PXB6 77 aa12.12□□□□□ -0.47
Ssbp4-201ENSMUST00000049908 Q8BT88 171 aa12.1□□□□□ -0.47
Ssbp4-201ENSMUST00000049908 Ifitm6A0A1B0GS75 124 aa12.09□□□□□ -0.47
Ssbp4-201ENSMUST00000049908 Gm7102J3QQ10 178 aa12.08□□□□□ -0.47
Ssbp4-201ENSMUST00000049908 Cox6a2P43023 97 aa12.08□□□□□ -0.47
Ssbp4-201ENSMUST00000049908 Chchd10Q7TNL9 138 aa12.06□□□□□ -0.48
Ssbp4-201ENSMUST00000049908 Ighv10-3A0A075B5T6 119 aa12.04□□□□□ -0.48
Ssbp4-201ENSMUST00000049908 1700018G05RikA0A1B0GSI2 66 aa12.04□□□□□ -0.48
Ssbp4-201ENSMUST00000049908 4932415D10RikA0A1W2P6U8 4986 aa12.04□□□□□ -0.48
Ssbp4-201ENSMUST00000049908 Spaca4Q80ZQ0 127 aa12.02□□□□□ -0.49
Ssbp4-201ENSMUST00000049908 Igkv8-27A0A0G2JF28 120 aa12□□□□□ -0.49
Ssbp4-201ENSMUST00000049908 Igkv8-30A0A140T8M3 121 aa12□□□□□ -0.49
Ssbp4-201ENSMUST00000049908 Gm12353A2AGJ4 60 aa12□□□□□ -0.49
Ssbp4-201ENSMUST00000049908 Hmcn2A2AJ76 5100 aa11.98□□□□□ -0.49
Ssbp4-201ENSMUST00000049908 Pcp4P63054 62 aa11.98□□□□□ -0.49
Ssbp4-201ENSMUST00000049908 Ubr4A2AN08 5180 aa11.95□□□□□ -0.5
Ssbp4-201ENSMUST00000049908 Gm10308Q9CVR5 141 aa11.95□□□□□ -0.5
Ssbp4-201ENSMUST00000049908 Igkv8-28A0A0G2JE47 121 aa11.94□□□□□ -0.5
Ssbp4-201ENSMUST00000049908 Igkv3-4A0A140T8Q4 119 aa11.94□□□□□ -0.5
Ssbp4-201ENSMUST00000049908 Pde6gP09174 87 aa11.94□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms