Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Gm25239-201ENSMUST00000174915 86 ntBASIC21.64■■□□□ 1.05
Gm10139O88245 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm10139O88245 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm10139O88245 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Gm10139O88245 Psd-208ENSMUST00000224556 2034 ntBASIC19.84■□□□□ 0.77
Gm10139O88245 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm10139O88245 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm10139O88245 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm10139O88245 Gm15042-201ENSMUST00000120212 883 ntBASIC19.43■□□□□ 0.7
Gm10139O88245 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm10139O88245 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm10139O88245 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm10139O88245 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.08■□□□□ 0.65
Gm10139O88245 Gm15045-201ENSMUST00000117359 883 ntBASIC19.08■□□□□ 0.64
Gm10139O88245 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm10139O88245 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm10139O88245 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm10139O88245 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm10139O88245 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm10139O88245 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm10139O88245 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm10139O88245 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm10139O88245 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm10139O88245 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm10139O88245 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm10139O88245 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.55■□□□□ 0.56
Gm10139O88245 Gm24109-201ENSMUST00000175489 103 ntBASIC18.53■□□□□ 0.56
Gm10139O88245 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm10139O88245 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm10139O88245 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm10139O88245 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.42■□□□□ 0.54
Gm10139O88245 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm10139O88245 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm10139O88245 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm10139O88245 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm10139O88245 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm10139O88245 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm10139O88245 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18.18■□□□□ 0.5
Gm10139O88245 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Gm10139O88245 Gm23366-201ENSMUST00000175022 89 ntBASIC18.16■□□□□ 0.5
Gm10139O88245 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.12■□□□□ 0.49
Gm10139O88245 Gm10524-201ENSMUST00000181931 1893 ntBASIC18.09■□□□□ 0.49
Gm10139O88245 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm10139O88245 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm10139O88245 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm10139O88245 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm10139O88245 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Gm10139O88245 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm10139O88245 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Gm10139O88245 AC153911.1-202ENSMUST00000218534 1034 ntBASIC17.81■□□□□ 0.44
Gm10139O88245 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm10139O88245 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm10139O88245 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC17.69■□□□□ 0.42
Gm10139O88245 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm10139O88245 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17.6■□□□□ 0.41
Gm10139O88245 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm10139O88245 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm10139O88245 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm10139O88245 Gm42596-201ENSMUST00000196305 1958 ntBASIC17.57■□□□□ 0.4
Gm10139O88245 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm10139O88245 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Gm10139O88245 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm10139O88245 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm10139O88245 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm10139O88245 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm10139O88245 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm10139O88245 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm10139O88245 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm10139O88245 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Gm10139O88245 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Gm10139O88245 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Gm10139O88245 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm10139O88245 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm10139O88245 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm10139O88245 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm10139O88245 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm10139O88245 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.2■□□□□ 0.34
Gm10139O88245 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm10139O88245 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10139O88245 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10139O88245 Gm27325-201ENSMUST00000175467 74 ntBASIC17.12■□□□□ 0.33
Gm10139O88245 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10139O88245 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm10139O88245 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm10139O88245 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm10139O88245 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.07■□□□□ 0.32
Gm10139O88245 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm10139O88245 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm10139O88245 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm10139O88245 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm10139O88245 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm10139O88245 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Gm10139O88245 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm10139O88245 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm10139O88245 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm10139O88245 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm10139O88245 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm10139O88245 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC16.91■□□□□ 0.3
Gm10139O88245 Gm25238-201ENSMUST00000174914 89 ntBASIC16.91■□□□□ 0.3
Gm10139O88245 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms