Protein–RNA interactions for Protein: A0A0U1RNU5

E130218I03Rik, RIKEN cDNA E130218I03 gene, mousemouse

Predictions only

Length 63 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E130218I03RikA0A0U1RNU5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
E130218I03RikA0A0U1RNU5 Gm25239-201ENSMUST00000174915 86 ntBASIC21.4■■□□□ 1.02
E130218I03RikA0A0U1RNU5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
E130218I03RikA0A0U1RNU5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
E130218I03RikA0A0U1RNU5 Psd-208ENSMUST00000224556 2034 ntBASIC20.69■□□□□ 0.9
E130218I03RikA0A0U1RNU5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
E130218I03RikA0A0U1RNU5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
E130218I03RikA0A0U1RNU5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
E130218I03RikA0A0U1RNU5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
E130218I03RikA0A0U1RNU5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
E130218I03RikA0A0U1RNU5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
E130218I03RikA0A0U1RNU5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
E130218I03RikA0A0U1RNU5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
E130218I03RikA0A0U1RNU5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
E130218I03RikA0A0U1RNU5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
E130218I03RikA0A0U1RNU5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
E130218I03RikA0A0U1RNU5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
E130218I03RikA0A0U1RNU5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
E130218I03RikA0A0U1RNU5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
E130218I03RikA0A0U1RNU5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.46■□□□□ 0.71
E130218I03RikA0A0U1RNU5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
E130218I03RikA0A0U1RNU5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
E130218I03RikA0A0U1RNU5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
E130218I03RikA0A0U1RNU5 Gm15042-201ENSMUST00000120212 883 ntBASIC19.39■□□□□ 0.69
E130218I03RikA0A0U1RNU5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
E130218I03RikA0A0U1RNU5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
E130218I03RikA0A0U1RNU5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
E130218I03RikA0A0U1RNU5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
E130218I03RikA0A0U1RNU5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
E130218I03RikA0A0U1RNU5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
E130218I03RikA0A0U1RNU5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
E130218I03RikA0A0U1RNU5 Gm15045-201ENSMUST00000117359 883 ntBASIC19■□□□□ 0.63
E130218I03RikA0A0U1RNU5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
E130218I03RikA0A0U1RNU5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
E130218I03RikA0A0U1RNU5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
E130218I03RikA0A0U1RNU5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18.86■□□□□ 0.61
E130218I03RikA0A0U1RNU5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
E130218I03RikA0A0U1RNU5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E130218I03RikA0A0U1RNU5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.79■□□□□ 0.6
E130218I03RikA0A0U1RNU5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.78■□□□□ 0.6
E130218I03RikA0A0U1RNU5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.76■□□□□ 0.59
E130218I03RikA0A0U1RNU5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
E130218I03RikA0A0U1RNU5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.75■□□□□ 0.59
E130218I03RikA0A0U1RNU5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
E130218I03RikA0A0U1RNU5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
E130218I03RikA0A0U1RNU5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
E130218I03RikA0A0U1RNU5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
E130218I03RikA0A0U1RNU5 Gm10524-201ENSMUST00000181931 1893 ntBASIC18.69■□□□□ 0.58
E130218I03RikA0A0U1RNU5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
E130218I03RikA0A0U1RNU5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
E130218I03RikA0A0U1RNU5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
E130218I03RikA0A0U1RNU5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
E130218I03RikA0A0U1RNU5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
E130218I03RikA0A0U1RNU5 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.55■□□□□ 0.56
E130218I03RikA0A0U1RNU5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
E130218I03RikA0A0U1RNU5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
E130218I03RikA0A0U1RNU5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
E130218I03RikA0A0U1RNU5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.47■□□□□ 0.55
E130218I03RikA0A0U1RNU5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
E130218I03RikA0A0U1RNU5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
E130218I03RikA0A0U1RNU5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
E130218I03RikA0A0U1RNU5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
E130218I03RikA0A0U1RNU5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
E130218I03RikA0A0U1RNU5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
E130218I03RikA0A0U1RNU5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
E130218I03RikA0A0U1RNU5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
E130218I03RikA0A0U1RNU5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
E130218I03RikA0A0U1RNU5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
E130218I03RikA0A0U1RNU5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
E130218I03RikA0A0U1RNU5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
E130218I03RikA0A0U1RNU5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
E130218I03RikA0A0U1RNU5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
E130218I03RikA0A0U1RNU5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
E130218I03RikA0A0U1RNU5 Gm24109-201ENSMUST00000175489 103 ntBASIC18.18■□□□□ 0.5
E130218I03RikA0A0U1RNU5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
E130218I03RikA0A0U1RNU5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
E130218I03RikA0A0U1RNU5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
E130218I03RikA0A0U1RNU5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
E130218I03RikA0A0U1RNU5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
E130218I03RikA0A0U1RNU5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.11■□□□□ 0.49
E130218I03RikA0A0U1RNU5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
E130218I03RikA0A0U1RNU5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
E130218I03RikA0A0U1RNU5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
E130218I03RikA0A0U1RNU5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
E130218I03RikA0A0U1RNU5 Gm23366-201ENSMUST00000175022 89 ntBASIC18.01■□□□□ 0.47
E130218I03RikA0A0U1RNU5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
E130218I03RikA0A0U1RNU5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
E130218I03RikA0A0U1RNU5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
E130218I03RikA0A0U1RNU5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
E130218I03RikA0A0U1RNU5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
E130218I03RikA0A0U1RNU5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
E130218I03RikA0A0U1RNU5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
E130218I03RikA0A0U1RNU5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
E130218I03RikA0A0U1RNU5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
E130218I03RikA0A0U1RNU5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
E130218I03RikA0A0U1RNU5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
E130218I03RikA0A0U1RNU5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC17.87■□□□□ 0.45
E130218I03RikA0A0U1RNU5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
E130218I03RikA0A0U1RNU5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
E130218I03RikA0A0U1RNU5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 1981.5 ms