Protein–RNA interactions for Protein: A0A0B4J1I0

Igkv1-110, Immunoglobulin kappa variable 1-110 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-110A0A0B4J1I0 Gm25239-201ENSMUST00000174915 86 ntBASIC22.16■■□□□ 1.14
Igkv1-110A0A0B4J1I0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Igkv1-110A0A0B4J1I0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Igkv1-110A0A0B4J1I0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv1-110A0A0B4J1I0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv1-110A0A0B4J1I0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Igkv1-110A0A0B4J1I0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv1-110A0A0B4J1I0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv1-110A0A0B4J1I0 Psd-208ENSMUST00000224556 2034 ntBASIC19.91■□□□□ 0.78
Igkv1-110A0A0B4J1I0 Gm15042-201ENSMUST00000120212 883 ntBASIC19.74■□□□□ 0.75
Igkv1-110A0A0B4J1I0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv1-110A0A0B4J1I0 Gm15045-201ENSMUST00000117359 883 ntBASIC19.31■□□□□ 0.68
Igkv1-110A0A0B4J1I0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv1-110A0A0B4J1I0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv1-110A0A0B4J1I0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv1-110A0A0B4J1I0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.05■□□□□ 0.64
Igkv1-110A0A0B4J1I0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Igkv1-110A0A0B4J1I0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igkv1-110A0A0B4J1I0 Gm24109-201ENSMUST00000175489 103 ntBASIC18.99■□□□□ 0.63
Igkv1-110A0A0B4J1I0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Igkv1-110A0A0B4J1I0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Igkv1-110A0A0B4J1I0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Igkv1-110A0A0B4J1I0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv1-110A0A0B4J1I0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv1-110A0A0B4J1I0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv1-110A0A0B4J1I0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv1-110A0A0B4J1I0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv1-110A0A0B4J1I0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Igkv1-110A0A0B4J1I0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Igkv1-110A0A0B4J1I0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Igkv1-110A0A0B4J1I0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Igkv1-110A0A0B4J1I0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv1-110A0A0B4J1I0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Igkv1-110A0A0B4J1I0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv1-110A0A0B4J1I0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv1-110A0A0B4J1I0 Gm23366-201ENSMUST00000175022 89 ntBASIC18.59■□□□□ 0.57
Igkv1-110A0A0B4J1I0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv1-110A0A0B4J1I0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv1-110A0A0B4J1I0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv1-110A0A0B4J1I0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.51■□□□□ 0.55
Igkv1-110A0A0B4J1I0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv1-110A0A0B4J1I0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv1-110A0A0B4J1I0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv1-110A0A0B4J1I0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv1-110A0A0B4J1I0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.37■□□□□ 0.53
Igkv1-110A0A0B4J1I0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv1-110A0A0B4J1I0 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.32■□□□□ 0.52
Igkv1-110A0A0B4J1I0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv1-110A0A0B4J1I0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv1-110A0A0B4J1I0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Igkv1-110A0A0B4J1I0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv1-110A0A0B4J1I0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18.14■□□□□ 0.49
Igkv1-110A0A0B4J1I0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Igkv1-110A0A0B4J1I0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.11■□□□□ 0.49
Igkv1-110A0A0B4J1I0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv1-110A0A0B4J1I0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Igkv1-110A0A0B4J1I0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv1-110A0A0B4J1I0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.06■□□□□ 0.48
Igkv1-110A0A0B4J1I0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igkv1-110A0A0B4J1I0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igkv1-110A0A0B4J1I0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv1-110A0A0B4J1I0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.92■□□□□ 0.46
Igkv1-110A0A0B4J1I0 Gm10524-201ENSMUST00000181931 1893 ntBASIC17.92■□□□□ 0.46
Igkv1-110A0A0B4J1I0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Igkv1-110A0A0B4J1I0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv1-110A0A0B4J1I0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv1-110A0A0B4J1I0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Igkv1-110A0A0B4J1I0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Igkv1-110A0A0B4J1I0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv1-110A0A0B4J1I0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv1-110A0A0B4J1I0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv1-110A0A0B4J1I0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Igkv1-110A0A0B4J1I0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.57■□□□□ 0.4
Igkv1-110A0A0B4J1I0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv1-110A0A0B4J1I0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv1-110A0A0B4J1I0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Igkv1-110A0A0B4J1I0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17.54■□□□□ 0.4
Igkv1-110A0A0B4J1I0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv1-110A0A0B4J1I0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igkv1-110A0A0B4J1I0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igkv1-110A0A0B4J1I0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv1-110A0A0B4J1I0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.49■□□□□ 0.39
Igkv1-110A0A0B4J1I0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv1-110A0A0B4J1I0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv1-110A0A0B4J1I0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv1-110A0A0B4J1I0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Igkv1-110A0A0B4J1I0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv1-110A0A0B4J1I0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv1-110A0A0B4J1I0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv1-110A0A0B4J1I0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv1-110A0A0B4J1I0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Igkv1-110A0A0B4J1I0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Igkv1-110A0A0B4J1I0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv1-110A0A0B4J1I0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.39■□□□□ 0.37
Igkv1-110A0A0B4J1I0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Igkv1-110A0A0B4J1I0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.38■□□□□ 0.37
Igkv1-110A0A0B4J1I0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.38■□□□□ 0.37
Igkv1-110A0A0B4J1I0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17.36■□□□□ 0.37
Igkv1-110A0A0B4J1I0 Gm25238-201ENSMUST00000174914 89 ntBASIC17.35■□□□□ 0.37
Igkv1-110A0A0B4J1I0 Gm27325-201ENSMUST00000175467 74 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms