RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Ly6hQ9WUC3 139 aa10.73□□□□□ -0.69
Trim54-201ENSMUST00000013771 Hectd4E9Q2E4 4418 aa10.72□□□□□ -0.69
Trim54-201ENSMUST00000013771 Gm29423A0A087WRM1 55 aa10.72□□□□□ -0.69
Trim54-201ENSMUST00000013771 Gm10518F6UQQ9 182 aa10.72□□□□□ -0.69
Trim54-201ENSMUST00000013771 Gm9903Q8C9Y8 129 aa10.72□□□□□ -0.69
Trim54-201ENSMUST00000013771 Lgals4Q8K419 326 aa10.72□□□□□ -0.69
Trim54-201ENSMUST00000013771 Ociad2Q9D8W7 154 aa10.72□□□□□ -0.69
Trim54-201ENSMUST00000013771 Gm7735D3YX18 52 aa10.71□□□□□ -0.69
Trim54-201ENSMUST00000013771 SycnQ8VCK7 134 aa10.71□□□□□ -0.69
Trim54-201ENSMUST00000013771 Gm28269A0A087WSG3 125 aa10.7□□□□□ -0.7
Trim54-201ENSMUST00000013771 Rpl28P41105 137 aaKnown RBP10.7□□□□□ -0.7
Trim54-201ENSMUST00000013771 Ighv1-56A0A0A6YXG2 117 aa10.69□□□□□ -0.7
Trim54-201ENSMUST00000013771 Gm10135F6TEE5 83 aa10.69□□□□□ -0.7
Trim54-201ENSMUST00000013771 SelenowP63300 88 aa10.69□□□□□ -0.7
Trim54-201ENSMUST00000013771 Dppa2Q9CWH0 301 aa10.69□□□□□ -0.7
Trim54-201ENSMUST00000013771 Hrct1Q9D6B9 109 aa10.68□□□□□ -0.7
Trim54-201ENSMUST00000013771 PkigO70139 76 aa10.67□□□□□ -0.7
Trim54-201ENSMUST00000013771 P01896 185 aa10.67□□□□□ -0.7
Trim54-201ENSMUST00000013771 Pfn2Q9JJV2 140 aa10.67□□□□□ -0.7
Trim54-201ENSMUST00000013771 Smim26Q3V460 107 aa10.66□□□□□ -0.7
Trim54-201ENSMUST00000013771 Defa23Q5G866 93 aa10.66□□□□□ -0.7
Trim54-201ENSMUST00000013771 Eif4ebp3Q80VV3 101 aa10.66□□□□□ -0.7
Trim54-201ENSMUST00000013771 Csdc2Q91YQ3 154 aa10.66□□□□□ -0.7
Trim54-201ENSMUST00000013771 Ush2AQ2QI47 5193 aa10.66□□□□□ -0.7
Trim54-201ENSMUST00000013771 B230359F08RikA0A0B4J1K3 109 aa10.65□□□□□ -0.7
Trim54-201ENSMUST00000013771 Trav3-1Q5R1I8 114 aa10.64□□□□□ -0.71
Trim54-201ENSMUST00000013771 LbhQ9CX60 105 aa10.64□□□□□ -0.71
Trim54-201ENSMUST00000013771 4932415D10RikA0A1W2P6U8 4986 aa10.63□□□□□ -0.71
Trim54-201ENSMUST00000013771 Dnal4Q9DCM4 105 aa10.63□□□□□ -0.71
Trim54-201ENSMUST00000013771 Igkv8-24A0A140T8P5 121 aa10.62□□□□□ -0.71
Trim54-201ENSMUST00000013771 Gm16381A0A1Y7VKT9 73 aa10.62□□□□□ -0.71
Trim54-201ENSMUST00000013771 Acyp1P56376 99 aa10.62□□□□□ -0.71
Trim54-201ENSMUST00000013771 2310009B15RikA0A0A6YWI4 143 aa10.61□□□□□ -0.71
Trim54-201ENSMUST00000013771 D6Ertd527eA0A0N4SWI3 464 aa10.61□□□□□ -0.71
Trim54-201ENSMUST00000013771 Igkv8-18A0A0B4J1J3 123 aa10.6□□□□□ -0.71
Trim54-201ENSMUST00000013771 Cox8cA6H666 72 aa10.6□□□□□ -0.71
Trim54-201ENSMUST00000013771 C530025M09RikF6RGA8 229 aa10.6□□□□□ -0.71
Trim54-201ENSMUST00000013771 P01819 144 aa10.6□□□□□ -0.71
Trim54-201ENSMUST00000013771 Cox7bP56393 80 aa10.6□□□□□ -0.71
Trim54-201ENSMUST00000013771 Igkv1-117A0A140T8M0 119 aa10.59□□□□□ -0.71
Trim54-201ENSMUST00000013771 Adm2Q7TNK8 150 aa10.59□□□□□ -0.71
Trim54-201ENSMUST00000013771 Cox7b2Q9D2H1 82 aa10.59□□□□□ -0.71
Trim54-201ENSMUST00000013771 Defa27F2Z403 93 aa10.58□□□□□ -0.72
Trim54-201ENSMUST00000013771 Pglyrp4Q0VB07 374 aa10.58□□□□□ -0.72
Trim54-201ENSMUST00000013771 9430015G10RikA2ASP7 199 aa10.58□□□□□ -0.72
Trim54-201ENSMUST00000013771 1700020N15RikL7MTX3 112 aa10.58□□□□□ -0.72
Trim54-201ENSMUST00000013771 Sprr1aQ62266 144 aa10.58□□□□□ -0.72
Trim54-201ENSMUST00000013771 Cby1Q9D1C2 127 aa10.58□□□□□ -0.72
Trim54-201ENSMUST00000013771 Xlr5cQ9JJR2 179 aa10.58□□□□□ -0.72
Trim54-201ENSMUST00000013771 Gm5153P01627 120 aa10.57□□□□□ -0.72
Trim54-201ENSMUST00000013771 A530084C06RikQ3UTW2 186 aa10.57□□□□□ -0.72
Trim54-201ENSMUST00000013771 Sigmar1O55242 223 aa10.56□□□□□ -0.72
Trim54-201ENSMUST00000013771 Gm9789Q8BIG3 52 aa10.56□□□□□ -0.72
Trim54-201ENSMUST00000013771 Trav3-4A0A075B654 114 aa10.55□□□□□ -0.72
Trim54-201ENSMUST00000013771 Igkv8-16A0A0G2JDG9 121 aa10.55□□□□□ -0.72
Trim54-201ENSMUST00000013771 Hbb-b2P02089 147 aa10.55□□□□□ -0.72
Trim54-201ENSMUST00000013771 A330070K13RikQ8CA53 115 aa10.55□□□□□ -0.72
Trim54-201ENSMUST00000013771 Mrpl55Q9CZ83 127 aa10.55□□□□□ -0.72
Trim54-201ENSMUST00000013771 Krtap14O08640 167 aa10.54□□□□□ -0.72
Trim54-201ENSMUST00000013771 Lyrm7Q9DA03 104 aa10.54□□□□□ -0.72
Trim54-201ENSMUST00000013771 Ube2d4D3YUH6 135 aa10.52□□□□□ -0.73
Trim54-201ENSMUST00000013771 Trav13-2A0A075B649 110 aa10.51□□□□□ -0.73
Trim54-201ENSMUST00000013771 A730009L09RikA0A1B0GS82 72 aa10.51□□□□□ -0.73
Trim54-201ENSMUST00000013771 Defb9Q8R2I6 67 aa10.51□□□□□ -0.73
Trim54-201ENSMUST00000013771 4930524J08RikQ9CUJ5 163 aa10.51□□□□□ -0.73
Trim54-201ENSMUST00000013771 Reg3dQ9QUS9 175 aa10.51□□□□□ -0.73
Trim54-201ENSMUST00000013771 Gm10767Q3TQP0 103 aa10.5□□□□□ -0.73
Trim54-201ENSMUST00000013771 Gm5142Q8C5X9 133 aa10.5□□□□□ -0.73
Trim54-201ENSMUST00000013771 Sprr4Q8CGN8 76 aa10.5□□□□□ -0.73
Trim54-201ENSMUST00000013771 MifP34884 115 aaKnown RBP10.5□□□□□ -0.73
Trim54-201ENSMUST00000013771 Cdip1Q9DB75 208 aa10.5□□□□□ -0.73
Trim54-201ENSMUST00000013771 Trav14-1A0A0G2JF94 121 aa10.49□□□□□ -0.73
Trim54-201ENSMUST00000013771 Defb29Q8BGW9 78 aa10.49□□□□□ -0.73
Trim54-201ENSMUST00000013771 Mrpl52Q9D0Y8 121 aa10.49□□□□□ -0.73
Trim54-201ENSMUST00000013771 A930033H14RikG5E8X6 103 aa10.48□□□□□ -0.73
Trim54-201ENSMUST00000013771 Gm10845Q3UNY9 185 aa10.48□□□□□ -0.73
Trim54-201ENSMUST00000013771 Camk2n2Q78WH7 79 aa10.47□□□□□ -0.73
Trim54-201ENSMUST00000013771 Ubr4A2AN08 5180 aa10.46□□□□□ -0.73
Trim54-201ENSMUST00000013771 NbdyA0A0N4SUI7 68 aa10.46□□□□□ -0.74
Trim54-201ENSMUST00000013771 Ufsp1Q9CZP0 217 aa10.46□□□□□ -0.74
Trim54-201ENSMUST00000013771 TeppQ6IMH0 216 aa10.45□□□□□ -0.74
Trim54-201ENSMUST00000013771 Hmcn2A2AJ76 5100 aa10.43□□□□□ -0.74
Trim54-201ENSMUST00000013771 Gm17577J3QNF7 156 aa10.43□□□□□ -0.74
Trim54-201ENSMUST00000013771 BC048502Q80Y74 154 aa10.43□□□□□ -0.74
Trim54-201ENSMUST00000013771 Ighv10-1A0A0B4J1J6 119 aa10.42□□□□□ -0.74
Trim54-201ENSMUST00000013771 Igkv1-35A0A0G2JDE5 120 aa10.42□□□□□ -0.74
Trim54-201ENSMUST00000013771 Gm9805F6YK59 57 aa10.42□□□□□ -0.74
Trim54-201ENSMUST00000013771 5730596B20RikQ8BQ08 205 aa10.42□□□□□ -0.74
Trim54-201ENSMUST00000013771 Cdk2ap2Q9CPY4 127 aa10.42□□□□□ -0.74
Trim54-201ENSMUST00000013771 Zcchc13Q9D548 170 aa10.42□□□□□ -0.74
Trim54-201ENSMUST00000013771 Wfdc12Q9JHY3 85 aa10.42□□□□□ -0.74
Trim54-201ENSMUST00000013771 Trav13n-2A0A0G2JF93 110 aa10.41□□□□□ -0.74
Trim54-201ENSMUST00000013771 Gm10770F7D043 238 aa10.41□□□□□ -0.74
Trim54-201ENSMUST00000013771 BatfO35284 125 aa10.41□□□□□ -0.74
Trim54-201ENSMUST00000013771 Xcl1P47993 114 aa10.41□□□□□ -0.74
Trim54-201ENSMUST00000013771 Pou2af1Q64693 256 aa10.41□□□□□ -0.74
Trim54-201ENSMUST00000013771 Ighv2-2A0A075B5P8 116 aa10.41□□□□□ -0.74
Trim54-201ENSMUST00000013771 Ighv2-5A0A0A6YY69 116 aa10.41□□□□□ -0.74
Trim54-201ENSMUST00000013771 P01821 116 aa10.41□□□□□ -0.74
Trim54-201ENSMUST00000013771 Rpl18aP62717 176 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 118.6 ms