Protein–RNA interactions for Protein: P01819

Ig heavy chain V region MOPC 141, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01819 Gm25239-201ENSMUST00000174915 86 ntBASIC23.32■■□□□ 1.32
P01819 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
P01819 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
P01819 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
P01819 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
P01819 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
P01819 Psd-208ENSMUST00000224556 2034 ntBASIC21.21■□□□□ 0.99
P01819 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
P01819 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P01819 Gm15042-201ENSMUST00000120212 883 ntBASIC20.57■□□□□ 0.88
P01819 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P01819 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
P01819 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P01819 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P01819 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P01819 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01819 Gm15045-201ENSMUST00000117359 883 ntBASIC20.1■□□□□ 0.81
P01819 Gm24109-201ENSMUST00000175489 103 ntBASIC20.1■□□□□ 0.81
P01819 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P01819 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
P01819 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
P01819 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P01819 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.79■□□□□ 0.76
P01819 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
P01819 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
P01819 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
P01819 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
P01819 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
P01819 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
P01819 Gm23366-201ENSMUST00000175022 89 ntBASIC19.55■□□□□ 0.72
P01819 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P01819 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P01819 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01819 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.32■□□□□ 0.68
P01819 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01819 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.16■□□□□ 0.66
P01819 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01819 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.15■□□□□ 0.66
P01819 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.11■□□□□ 0.65
P01819 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01819 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01819 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.1■□□□□ 0.65
P01819 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
P01819 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
P01819 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01819 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01819 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
P01819 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01819 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.99■□□□□ 0.63
P01819 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
P01819 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
P01819 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01819 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01819 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18.89■□□□□ 0.61
P01819 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.89■□□□□ 0.61
P01819 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
P01819 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01819 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P01819 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P01819 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01819 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01819 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01819 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC18.6■□□□□ 0.57
P01819 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P01819 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
P01819 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P01819 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01819 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01819 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01819 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
P01819 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01819 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
P01819 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.43■□□□□ 0.54
P01819 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
P01819 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01819 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01819 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.37■□□□□ 0.53
P01819 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P01819 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01819 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01819 Gm25238-201ENSMUST00000174914 89 ntBASIC18.33■□□□□ 0.52
P01819 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01819 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P01819 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
P01819 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P01819 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
P01819 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
P01819 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P01819 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
P01819 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
P01819 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P01819 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
P01819 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.14■□□□□ 0.49
P01819 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01819 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01819 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
P01819 Gm27325-201ENSMUST00000175467 74 ntBASIC18.04■□□□□ 0.48
P01819 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.04■□□□□ 0.48
P01819 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P01819 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms